More than 300 homologs were found in PanDaTox collection
for query gene Rru_A2749 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2749  hypothetical protein  100 
 
 
409 aa  790    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0349567  n/a   
 
 
-
 
NC_013440  Hoch_6489  protein of unknown function DUF214  40 
 
 
406 aa  224  3e-57  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3411  ABC transporter, inner membrane subunit  37.5 
 
 
405 aa  214  1.9999999999999998e-54  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.108471  n/a   
 
 
-
 
NC_011891  A2cp1_3560  protein of unknown function DUF214  37.62 
 
 
405 aa  214  2.9999999999999995e-54  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4227  hypothetical protein  34.31 
 
 
408 aa  210  3e-53  Xanthobacter autotrophicus Py2  Bacteria  normal  0.405326  normal  0.650749 
 
 
-
 
NC_011662  Tmz1t_2826  protein of unknown function DUF214  35.56 
 
 
406 aa  199  5e-50  Thauera sp. MZ1T  Bacteria  normal  0.663211  n/a   
 
 
-
 
NC_008781  Pnap_0081  hypothetical protein  34.97 
 
 
420 aa  195  1e-48  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.466459  normal 
 
 
-
 
NC_007778  RPB_3882  hypothetical protein  32.68 
 
 
408 aa  187  3e-46  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00664536  normal 
 
 
-
 
NC_007958  RPD_1470  hypothetical protein  31.86 
 
 
404 aa  184  2.0000000000000003e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.901126 
 
 
-
 
NC_007925  RPC_3827  hypothetical protein  30.27 
 
 
408 aa  181  1e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1840  protein of unknown function DUF214  29.95 
 
 
408 aa  177  2e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.487797  n/a   
 
 
-
 
NC_011145  AnaeK_3254  protein of unknown function DUF214  34.93 
 
 
404 aa  178  2e-43  Anaeromyxobacter sp. K  Bacteria  normal  0.12838  n/a   
 
 
-
 
NC_009485  BBta_1848  putative lipoprotein-releasing system transmembrane protein lolC  32.52 
 
 
408 aa  160  3e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.517153  normal 
 
 
-
 
NC_011060  Ppha_0421  protein of unknown function DUF214  29.93 
 
 
422 aa  150  3e-35  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.850184  n/a   
 
 
-
 
NC_010831  Cphamn1_0609  protein of unknown function DUF214  27.99 
 
 
422 aa  149  6e-35  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.00000928533  normal  0.012024 
 
 
-
 
NC_006369  lpl0881  hypothetical protein  28.4 
 
 
416 aa  147  4.0000000000000006e-34  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_0551  protein of unknown function DUF214  28.06 
 
 
422 aa  147  4.0000000000000006e-34  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.0000638831  normal  0.237108 
 
 
-
 
NC_006368  lpp0912  hypothetical protein  28.16 
 
 
416 aa  145  1e-33  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007512  Plut_1763  putative ABC transporter, integral membrane protein  28.7 
 
 
422 aa  145  1e-33  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.412712 
 
 
-
 
NC_010338  Caul_2978  hypothetical protein  29.4 
 
 
419 aa  139  7.999999999999999e-32  Caulobacter sp. K31  Bacteria  normal  0.231225  normal 
 
 
-
 
NC_008639  Cpha266_0386  hypothetical protein  27.29 
 
 
422 aa  137  5e-31  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.574376  n/a   
 
 
-
 
NC_007514  Cag_1781  lipoprotein releasing system  26.49 
 
 
424 aa  136  6.0000000000000005e-31  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0490622  n/a   
 
 
-
 
NC_011060  Ppha_0718  protein of unknown function DUF214  25.96 
 
 
424 aa  134  3e-30  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2534  hypothetical protein  28.33 
 
 
416 aa  133  5e-30  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.176241  normal  0.761271 
 
 
-
 
NC_007355  Mbar_A3444  putative ABC transporter permease protein  27.64 
 
 
389 aa  132  1.0000000000000001e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0182994  normal  0.122472 
 
 
-
 
NC_010831  Cphamn1_0418  protein of unknown function DUF214  27.15 
 
 
422 aa  130  3e-29  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.0611297 
 
 
-
 
NC_008553  Mthe_0918  hypothetical protein  26.06 
 
 
389 aa  129  1.0000000000000001e-28  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0590  hypothetical protein  25.06 
 
 
424 aa  125  2e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1599  lipoprotein releasing system  28.27 
 
 
422 aa  124  3e-27  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.526116 
 
 
-
 
NC_007355  Mbar_A3445  hypothetical protein  26.78 
 
 
389 aa  123  6e-27  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.000000235465  normal  0.187048 
 
 
-
 
NC_007519  Dde_1366  LolC/E family lipoprotein releasing system, transmembrane protein  28.28 
 
 
408 aa  122  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.217764  n/a   
 
 
-
 
NC_009485  BBta_4040  putative lipoprotein-releasing system transmembrane protein (lolC)  27.95 
 
 
411 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0498435 
 
 
-
 
NC_007514  Cag_0371  putative ABC transporter, integral membrane protein  25.71 
 
 
422 aa  120  6e-26  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.258896  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0832  protein of unknown function DUF214  22.97 
 
 
417 aa  117  3e-25  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.654649  n/a   
 
 
-
 
NC_008751  Dvul_0889  LolC/E family lipoprotein releasing system, transmembrane protein  26.48 
 
 
411 aa  113  7.000000000000001e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0317  protein of unknown function DUF214  25.42 
 
 
422 aa  111  3e-23  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2811  LolC/E family lipoprotein releasing system, transmembrane protein  25.62 
 
 
424 aa  110  6e-23  Caulobacter sp. K31  Bacteria  normal  0.0243258  normal  0.703642 
 
 
-
 
NC_008609  Ppro_3015  LolC/E family lipoprotein releasing system, transmembrane protein  25.06 
 
 
420 aa  108  1e-22  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2994  lipoprotein releasing system, transmembrane protein, LolC/E family  25.62 
 
 
417 aa  107  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0613  lipoprotein releasing system, transmembrane protein, LolC/E family  28.36 
 
 
411 aa  107  5e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  unclonable  0.00000287642  n/a   
 
 
-
 
NC_009620  Smed_3748  hypothetical protein  26.15 
 
 
416 aa  105  1e-21  Sinorhizobium medicae WSM419  Bacteria  normal  0.244082  normal 
 
 
-
 
NC_007520  Tcr_1172  LolC/E family lipoprotein releasing system, transmembrane protein  22.87 
 
 
416 aa  105  1e-21  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0830739  n/a   
 
 
-
 
NC_007947  Mfla_2095  LolC/E family lipoprotein releasing system, transmembrane protein  26.24 
 
 
421 aa  105  1e-21  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00459774  normal 
 
 
-
 
NC_009943  Dole_2846  LolC/E family lipoprotein releasing system, transmembrane protein  22.94 
 
 
408 aa  105  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1000  lipoprotein releasing system, transmembrane protein, LolC/E family  23.86 
 
 
439 aa  103  7e-21  Methylobacterium populi BJ001  Bacteria  normal  normal  0.14096 
 
 
-
 
NC_007643  Rru_A1578  LolC/E family lipoprotein releasing system, transmembrane protein  24.76 
 
 
417 aa  102  9e-21  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0665062  n/a   
 
 
-
 
NC_013422  Hneap_0224  lipoprotein releasing system, transmembrane protein, LolC/E family  24.29 
 
 
415 aa  102  9e-21  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0374875  n/a   
 
 
-
 
NC_010644  Emin_1310  hypothetical protein  24.03 
 
 
409 aa  102  1e-20  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3743  LolC/E family lipoprotein releasing system, transmembrane protein  24.43 
 
 
410 aa  100  6e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.14534  normal 
 
 
-
 
NC_013730  Slin_1839  protein of unknown function DUF214  25 
 
 
416 aa  99.8  7e-20  Spirosoma linguale DSM 74  Bacteria  normal  0.877105  normal  0.633197 
 
 
-
 
NC_011146  Gbem_0837  lipoprotein releasing system, transmembrane protein, LolC/E family  23.25 
 
 
416 aa  99.4  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.0822431  n/a   
 
 
-
 
NC_010571  Oter_3938  hypothetical protein  23.82 
 
 
414 aa  99  1e-19  Opitutus terrae PB90-1  Bacteria  normal  0.158906  normal 
 
 
-
 
NC_011989  Avi_1740  ABC transporter membrane spanning protein  22.5 
 
 
435 aa  98.2  2e-19  Agrobacterium vitis S4  Bacteria  normal  0.147499  n/a   
 
 
-
 
NC_011059  Paes_0385  protein of unknown function DUF214  25.75 
 
 
422 aa  98.6  2e-19  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0295868  normal  0.0668384 
 
 
-
 
NC_007347  Reut_A1076  LolC/E family lipoprotein releasing system, transmembrane protein  26.52 
 
 
416 aa  98.2  2e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.0609031  n/a   
 
 
-
 
NC_008789  Hhal_1252  LolC/E family lipoprotein releasing system, transmembrane protein  24.94 
 
 
414 aa  98.2  2e-19  Halorhodospira halophila SL1  Bacteria  normal  0.368874  n/a   
 
 
-
 
NC_010172  Mext_1065  LolC/E family lipoprotein releasing system, transmembrane protein  23.61 
 
 
439 aa  97.4  4e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.123078 
 
 
-
 
NC_011757  Mchl_1195  lipoprotein releasing system, transmembrane protein, LolC/E family  23.61 
 
 
439 aa  97.4  4e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0758  lipoprotein releasing system, transmembrane protein, LolC/E family  22.56 
 
 
420 aa  97.1  6e-19  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00020569  n/a   
 
 
-
 
NC_012918  GM21_3423  lipoprotein releasing system, transmembrane protein, LolC/E family  22.14 
 
 
416 aa  96.7  7e-19  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1365  lipoprotein releasing system, transmembrane protein, LolC/E family  23.15 
 
 
415 aa  96.3  9e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1761  LolC/E family lipoprotein releasing system, transmembrane protein  25.42 
 
 
414 aa  95.9  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.293206  normal 
 
 
-
 
NC_009727  CBUD_1046  lipoprotein releasing system transmembrane protein  24.41 
 
 
414 aa  95.9  1e-18  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0938  LolC/E family lipoprotein releasing system, transmembrane protein  24.41 
 
 
414 aa  95.9  1e-18  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1577  protein of unknown function DUF214  21.83 
 
 
401 aa  95.9  1e-18  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.340093  n/a   
 
 
-
 
NC_009524  PsycPRwf_1740  LolC/E family lipoprotein releasing system, transmembrane protein  24.04 
 
 
411 aa  95.5  2e-18  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.170655 
 
 
-
 
NC_007794  Saro_1765  LolC/E family lipoprotein releasing system, transmembrane protein  24.1 
 
 
413 aa  95.1  2e-18  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.157209  n/a   
 
 
-
 
NC_013223  Dret_2233  lipoprotein releasing system, transmembrane protein, LolC/E family  24.37 
 
 
409 aa  94.7  2e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1796  LolC/E family lipoprotein releasing system, transmembrane protein  25.45 
 
 
439 aa  94.4  3e-18  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.401704  normal 
 
 
-
 
NC_010531  Pnec_0489  lipoprotein releasing system, transmembrane protein, LolC/E family  24.94 
 
 
420 aa  94.4  3e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1033  LolC/E family lipoprotein releasing system, transmembrane protein  23.63 
 
 
413 aa  94  4e-18  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.229485 
 
 
-
 
NC_013440  Hoch_1920  protein of unknown function DUF214  25.97 
 
 
470 aa  94  4e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.911684  normal 
 
 
-
 
NC_009379  Pnuc_1468  LolC/E family lipoprotein releasing system, transmembrane protein  26.82 
 
 
420 aa  94  4e-18  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4409  LolC/E family lipoprotein releasing system, transmembrane protein  24.26 
 
 
433 aa  92.4  1e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.452061 
 
 
-
 
NC_008044  TM1040_1846  LolC/E family lipoprotein releasing system, transmembrane protein  25.11 
 
 
427 aa  91.7  2e-17  Ruegeria sp. TM1040  Bacteria  normal  0.105079  normal  0.498084 
 
 
-
 
NC_013173  Dbac_3383  lipoprotein releasing system, transmembrane protein, LolC/E family  24.49 
 
 
409 aa  91.7  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2040  LolC/E family lipoprotein releasing system, transmembrane protein  24.4 
 
 
436 aa  92  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.489126  normal 
 
 
-
 
NC_013889  TK90_1199  lipoprotein releasing system, transmembrane protein, LolC/E family  25.54 
 
 
416 aa  90.9  3e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.132324 
 
 
-
 
NC_007973  Rmet_1040  LolC/E family lipoprotein releasing system, transmembrane protein  25.3 
 
 
416 aa  90.5  4e-17  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.678846 
 
 
-
 
NC_008009  Acid345_3567  LolC/E family lipoprotein releasing system, transmembrane protein  23.56 
 
 
423 aa  90.9  4e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.756596  normal 
 
 
-
 
NC_012850  Rleg_1372  lipoprotein releasing system, transmembrane protein, LolC/E family  21.87 
 
 
434 aa  90.5  5e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2993  protein of unknown function DUF214  25.91 
 
 
375 aa  90.1  6e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2346  LolC/E family lipoprotein releasing system, transmembrane protein  24.55 
 
 
416 aa  90.1  6e-17  Sphingomonas wittichii RW1  Bacteria  normal  0.323587  normal 
 
 
-
 
NC_007958  RPD_2864  LolC/E family lipoprotein releasing system, transmembrane protein  20.82 
 
 
422 aa  89.7  7e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.998701  normal  0.300269 
 
 
-
 
NC_007964  Nham_2196  LolC/E family lipoprotein releasing system, transmembrane protein  21.31 
 
 
426 aa  89.7  8e-17  Nitrobacter hamburgensis X14  Bacteria  decreased coverage  0.00714902  n/a   
 
 
-
 
NC_003910  CPS_3477  lipoprotein releasing system transmembrane protein LolE  25.53 
 
 
422 aa  89.7  9e-17  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3239  LolC/E family lipoprotein releasing system, transmembrane protein  23.13 
 
 
424 aa  89.4  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0892821  n/a   
 
 
-
 
NC_011894  Mnod_4145  lipoprotein releasing system, transmembrane protein, LolC/E family  23.52 
 
 
428 aa  89.4  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2669  LolC/E family lipoprotein releasing system, transmembrane protein  23.26 
 
 
415 aa  89  1e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1563  protein of unknown function DUF214  24.21 
 
 
385 aa  88.6  2e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0940  LolC/E family lipoprotein releasing system, transmembrane protein  23.46 
 
 
415 aa  88.6  2e-16  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012849  Rpic12D_5303  protein of unknown function DUF214  25.65 
 
 
830 aa  88.6  2e-16  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3275  lipoprotein releasing system, transmembrane protein, LolC/E family  21.31 
 
 
422 aa  88.6  2e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.314483  n/a   
 
 
-
 
NC_011666  Msil_0700  lipoprotein releasing system, transmembrane protein, LolC/E family  24.32 
 
 
423 aa  88.2  2e-16  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_3204  LolC/E family lipoprotein releasing system, transmembrane protein  23.43 
 
 
427 aa  88.2  2e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.22882  normal 
 
 
-
 
NC_008709  Ping_2201  lipoprotein releasing system, transmembrane protein, LolC/E family protein  24.94 
 
 
413 aa  88.6  2e-16  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.177002 
 
 
-
 
NC_009901  Spea_1547  LolC/E family lipoprotein releasing system, transmembrane protein  24.46 
 
 
417 aa  88.2  2e-16  Shewanella pealeana ATCC 700345  Bacteria  normal  0.124688  n/a   
 
 
-
 
NC_008340  Mlg_1440  LolC/E family lipoprotein releasing system, transmembrane protein  24.22 
 
 
415 aa  88.6  2e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.141439  normal  0.211841 
 
 
-
 
NC_011369  Rleg2_1280  lipoprotein releasing system, transmembrane protein, LolC/E family  21.64 
 
 
434 aa  88.2  2e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0107812  normal  0.317103 
 
 
-
 
NC_010682  Rpic_0960  lipoprotein releasing system, transmembrane protein, LolC/E family  23.94 
 
 
416 aa  87.8  3e-16  Ralstonia pickettii 12J  Bacteria  normal  0.100135  normal  0.0249332 
 
 
-
 
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