| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2201 |
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| Symbol | |
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| ID | 4625235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2678172 |
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| End bp | 2679413 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639797339 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family protein |
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| Protein accession | YP_943541 |
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| Protein GI | 119945861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.177002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCGCC CTTTATTAAT TTTTATCGGC CTGCGATATA GTAAGGCTAA ACATAAAAAT
AAGTTTGTTT CTTTTATTTC TATGGCCTCC ATATTGGGTA TCGCGCTTGG GGTGACTGCA
TTAATTGTCG GCCTGTCGGC AATGAATGGT TTTGAAAAGG CATTACGTGA TCAGATGTTA
GCTGTTATTC CTCATGCAGA GTTAGAAACA GTCAATGGTA GCTTTGAAAA TCTGGACAGT
TCCTTAAAAC AAGTCAGGCA TCATCCCGGT GTTATTGCCG CAAGCCCGTA CATTATGCTG
AATGGTTTAT TGCAAAAAGA TGATCAAATA AAAGCGTTGC AAATTAGAGC GATAGCCCCG
AAAAGTGAAA GGGATGTGAC AGCTGTTGAG CATTATATAA AAGGCGGAGG CTGGGAGTTA
TTAAAAACGG GGCAGCGTTC AATCGTATTA GGTAAAAGTG TTGCACTGAA GCTTGCTATG
AAGATAGGTG ACTCGTTAAC ATTAATATTG CCGCAAGAGG GTGGACAACA ATTAAAATCT
CCTCGTAAAA TAAAGCTCAC CTTAGTGGGG TTATTTGAAA TGGGAGGGCA GTTAGATAAC
GCCCTTGGTT TTATGCATAT CGACGATGCC AAACAAATAT TGGGACTCGA CAGTGCGAAT
GGGATTGCTT TTAAAGTAGC GGATATATTA GATGCACAAA CATTAGCACG GGACGTGGGT
TATAGTCTTA ATGATTATCT GTATATAAAA AGCTGGATCA CCAGCCAGGG TTATTTATAT
CAAGATATTC AGATGGTTAA ATCTTTAATG TATGTCATTT TATTGCTGGT TATCGCCGTT
GCCTGTTTTA ATATTGTATC TACTCTGGTG ATGGCCGTTA ATGAAAAAAG AGGCGACATT
GCTATTTTAA AAACCATGGG GGCCTCAAAA TGGTTGTTAC GCGGTATATT CATCGTGCAG
GGGGCATTTA ATGGTCTGGT AGGTTGTCTT TTAGGTGCTG CTATCGGTAT TTTTATTGCC
TTAAATTTGA CCGATATTGT TAAATTTATA GAAACTGTCA TCGGCCATAA ATTCTTATCG
GGTGATGTTT ATTTTATAGA TTTTTTACCC TCACATTTAA TTTATGAGCA AGTTATTGTT
GTGACTGTTG CCGCTTTTTT TATGAGTGTG TTATCTACTC TATATCCCGC TTGGCGGGCA
AGTAAGATCC AGCCTGCATT GGAACTAGGA TTTGCTCATT AG
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| Protein sequence | MFRPLLIFIG LRYSKAKHKN KFVSFISMAS ILGIALGVTA LIVGLSAMNG FEKALRDQML
AVIPHAELET VNGSFENLDS SLKQVRHHPG VIAASPYIML NGLLQKDDQI KALQIRAIAP
KSERDVTAVE HYIKGGGWEL LKTGQRSIVL GKSVALKLAM KIGDSLTLIL PQEGGQQLKS
PRKIKLTLVG LFEMGGQLDN ALGFMHIDDA KQILGLDSAN GIAFKVADIL DAQTLARDVG
YSLNDYLYIK SWITSQGYLY QDIQMVKSLM YVILLLVIAV ACFNIVSTLV MAVNEKRGDI
AILKTMGASK WLLRGIFIVQ GAFNGLVGCL LGAAIGIFIA LNLTDIVKFI ETVIGHKFLS
GDVYFIDFLP SHLIYEQVIV VTVAAFFMSV LSTLYPAWRA SKIQPALELG FAH
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