Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0081 |
Symbol | |
ID | 4686291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 84719 |
End bp | 85981 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639833075 |
Product | hypothetical protein |
Protein accession | YP_980328 |
Protein GI | 121602999 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.466459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTTCAC GCCACCGCCC CGCCCTGAGT TCCTGGACCC GCTGGATGCC GTTCGAGCTG CTGGTGGCGC TGCGCTTTTT GCGCGAAGGC CGCATGCAGA GCGTCTTGAT CCTGGCCGGC GTGACCGGCG GCGTGGCGGT CATCATTTTC TTGACCCAGC TCATCAACCA GTTGCAATCG ACCATCATCG ACCGGGTGCT GGGCTCGCAG GCGCATGTGG TGATCCGGCC GCTCGAAGAA GTCACGCAGC GCGTCGTCAC GCCCAGCGAA GACCGCGCCG TGGCCGCCGT GGTGCAGCCG CGCGACCAGC GCCTGCGCTC GGTGGACCAG TGGGAGCGCA TCGCCGGCCT GGCCGCCGCC ACGCCCGGCG TGCTGGCGGT GTCGCCCGTG GTCAGCGGCC CGGCCTTTGC GTCGCGCGGC AACAGCAACA AGAGCGTCGC GCTGCTCGGC GTGCAGCCCG ACGCCTACCG GCGCGTGGTG CGCATGGACG ACTACATGAC GCGCGGCCGC TTCGACGTGA CCGGCAGCAA CACCCTGATC GGCGTTGACC TGGCCAGCGA CCTGGGCGTG ACCGTAGGCG ACAAGTTGCG CGTGACCAGC GCCAGCGGCC GCACGGAAAC GCTGGACATC ACCGGCCTGT TCGACATGGG CAACCGCGAC CTGAACCGGC GCTGGGTGTT CGTCACGCTC AAACTCGCGC AGACGTTGCT TGATTTGCCC GGCGGCGTGT CCAACATCGA CCTGACGGTG AAGGATCTGT TTGGCGCCAA CCAGGTTGCC GACGCCCTGC GCGCCCAGAC CGGCCTGACG GTGGACAGCT GGATGCAGAC CAACTCCGGC CTGCTCAACG CCCTGAGCAA CCAGACGGTG TCGAACAACC TGATCCGCAG CTTTGTCGTG ATCATCGTGG CGCTCGGCAT TTCCAGCGTG CTGGTGGTCA GCGTGGTGCA AAAGCAGCGC GAAATCGGCA TTCTGCGGGC CATGGGCGCC GGGCGGCGGC GCATCATGAC GGTGTTTTTG CTGCAGGGCG GGCTGGTCGG GCTGGCCGGC TCGGTGCTCG GATCGGCGCT GGCCTTCGGC CTGCTGGTAG TGTTTTCGCA CGTCTTCAAA AGCCCTGATG GCGGCTCGCT GTTTTCGGCG CAACTCGACC CGATGCTGGT GCTGCTGGCG TCGGTCGTGG CCTGCGGGGT CGGGCTGGCG GCGGCGGCGA TACCGGCGCG CAGCGCGGCG AGGATGGACC CGGTGCAGGC GATTAGGGCT TGA
|
Protein sequence | MLSRHRPALS SWTRWMPFEL LVALRFLREG RMQSVLILAG VTGGVAVIIF LTQLINQLQS TIIDRVLGSQ AHVVIRPLEE VTQRVVTPSE DRAVAAVVQP RDQRLRSVDQ WERIAGLAAA TPGVLAVSPV VSGPAFASRG NSNKSVALLG VQPDAYRRVV RMDDYMTRGR FDVTGSNTLI GVDLASDLGV TVGDKLRVTS ASGRTETLDI TGLFDMGNRD LNRRWVFVTL KLAQTLLDLP GGVSNIDLTV KDLFGANQVA DALRAQTGLT VDSWMQTNSG LLNALSNQTV SNNLIRSFVV IIVALGISSV LVVSVVQKQR EIGILRAMGA GRRRIMTVFL LQGGLVGLAG SVLGSALAFG LLVVFSHVFK SPDGGSLFSA QLDPMLVLLA SVVACGVGLA AAAIPARSAA RMDPVQAIRA
|
| |