Gene Caul_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2811 
Symbol 
ID5900266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3052729 
End bp3054003 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID641563303 
ProductLolC/E family lipoprotein releasing system, transmembrane protein 
Protein accessionYP_001684436 
Protein GI167646773 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0243258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.703642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG GCGCGGGTCC GTTCGGAACC TGGGAGCGCA CGGTCGCCTG GCGATACCTG 
CGCAACAAGC GCAAGAACGG CGGCGTGGCG CTGATCGCCA TCATCTCGTT CGCGGCGGTG
ATGCTGGCGG TCTTCGCCCT GATCACCGTG ATGAGCGTGA TGAACGGCTT CCGCGCCGAG
CTTCTAGGCC GGCTGCTGGG CTTCAACGGT CACGTCTACG CGCAAGGCCC GTTGCTGAAC
GGACCCGACC GCGACGGCGT CATCACCCGC ATCAAAGCCG TGCCCGGCGT GACTCAGGCC
GCGCCGATGG TCGAGGCCCA GGCCATGGTC ATCGGCCCCA GCCAGGTGTC GGGGGCCATC
GTGCGGGGCG TCACGCCGCA AGATCTGCGC GGCATGAAGA TGATCTCGAC CAACATCAAG
CGCGGCTCGC TGGCCGGGTT CGGCGAGGGC GAGTACGGCG GCGACATCGT GCTGATCGGC
GACCGCATGG CCCGCAATCT GGGCCTGTCG GTCGGTGACG CCATCACCCT GATCTCGCCC
TCGGGCCCGG CCACGGCGTT CGGAACCTCG ACGCGCGAGA AGGACTACAC GGTCGGCGGC
ATCTTCAGCG TCGGCATGAG CCAGTTCGAC GAGAGTTTCG TCTACATGGC GCTGCCCCAG
GCTCAACTCT TCTTCGGACG GGATGCGTCG ATCGACTATG TCGAGATCAA GGTCGCCGAC
CCCGACAAGG CCAAGGCCAT CAAGCCGGTC ATCGAGCAGG CCAGCGGCCC CGGCGCCTTC
GTCCAGGACT GGATGGACAA GAACTCCAGC TACTTCAACG CCCTGCAGGT CGAGCGCAAG
GTGATGCGGC TGATCCTGTT CTTCATCGTC GCCATCGCCA CCCTGAACAT CATCTCGGCC
CTGGTCATGC TGGTGAAGAA CAAGGGGCGC GACATCGCCA TCCTGCGGAC CATGGGCGCC
AGCCAGGCCT CGATCCTGCG GATCTTCGTG ATGGCCGGCG CCTCGATCGG CCTGTCAGGC
ACCTTGGCGG GCCTGCTGCT GGGCGTGCTG TTCTGCGCCA ACATCACCGC CATCCAGGCC
TTCGTCGAGT GGCTGACCGG GACGGCGGTG TTCAGCGCCG ATATCTATTT CCTGGCCCAC
ATCCCCGCCA AGATCGACTG GTCCGAGGTG GCCGGCATCG TCGGCATCTC CACGGCGATG
AGCATCCTGG CCACCCTGCC GCCCGCCATC CGCGCCTCGC GGCTCGATCC GGTCGAGGCC
CTTCGTTATG AGTAA
 
Protein sequence
MALGAGPFGT WERTVAWRYL RNKRKNGGVA LIAIISFAAV MLAVFALITV MSVMNGFRAE 
LLGRLLGFNG HVYAQGPLLN GPDRDGVITR IKAVPGVTQA APMVEAQAMV IGPSQVSGAI
VRGVTPQDLR GMKMISTNIK RGSLAGFGEG EYGGDIVLIG DRMARNLGLS VGDAITLISP
SGPATAFGTS TREKDYTVGG IFSVGMSQFD ESFVYMALPQ AQLFFGRDAS IDYVEIKVAD
PDKAKAIKPV IEQASGPGAF VQDWMDKNSS YFNALQVERK VMRLILFFIV AIATLNIISA
LVMLVKNKGR DIAILRTMGA SQASILRIFV MAGASIGLSG TLAGLLLGVL FCANITAIQA
FVEWLTGTAV FSADIYFLAH IPAKIDWSEV AGIVGISTAM SILATLPPAI RASRLDPVEA
LRYE