| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1000 |
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| Symbol | |
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| ID | 6309701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1062506 |
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| End bp | 1063825 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642649721 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_001923711 |
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| Protein GI | 188580266 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.14096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG CGTTGGGCAA GGGCGGCGTC TCCTTGAGAG GCGCCCTGGA ACGGCTGAAG
AATGCCCGCG CGAGCGCCTC GACGCCGCCT TTCGCCGGAT TCGAGTGGAT CATCGCCGGC
CGCTACCTGC GCGCCCGCCG CCGGGGCGGC GGCGTCTCGG TGGTGGCCCT GTTCTCGGTG
CTCGGCATCG CGGTCGGCGT GGCGACCCTC ATCATCGTGC TCTCGGTGAT GAACGGCTTC
CGCACCGAGC TGCGCTCCAA GATCATCGGG CTCAACGGCC ACGTCTTCGC CGCGCCGATC
GATCGGCTCT TCACCGATTA CGTCGATCTC TCGGAGCGCC TGGAAAAGGT CGCGGGCGTG
CGCGCCGTCG TGCCGATGGT GCAGGGGCAG GCCTTCGCCT CCTCGCCCTA TGGCGGCTCC
GGCGTGCTCG TGCGCGGCGT GCGCGAATCC GACCTGCCGA AGATCCCGGC CGTCTCCGGC
GCGATCAAGA GCGGCACGCT GGAGGGCTTC GACGACGGCC AGGGCGTGGC GCTCGGCAAG
CGGCTCGCCG ACGCCCTCGG CCTCCAGGCC GGCGATCAGG TCACGCTCTC GACGCCGAAG
GGCGCGAGCA CGCCGTTCGG CACCGCGCCG CGCACCAAGA CCTACACCGT CAAGGCGATC
TTCGAGATCG GCGTGACCGA TTTCGACACC ACCATGGCCT TCATGCCGCT GGCCGAGGCG
CAGGCCTTCT TCAATCGCGA CGGCGACGTC AGCGTGATCG AGATCTATCT CGACGACGCC
GACGCGGTCG GCGAGATGCG CGAGCCCCTG GAGATGGCGG CCGAGCGCCC CGTGCTGCTC
ACCGACTGGC GCCAGACCAA CCGCACCTTC TTCGGGGCGC TCGAGGTGGA GCGGAACGTG
ATGTTCCTCA TCCTCAACCT CATCGTCATC GTCGCGACCC TGAACATCAT CTCAGGGCTG
ATCCTGCTCG TGCGCGACAA GTCCTCGGAC ATCGCGATCC TGCGCACCAT GGGGGCGACG
CCGGGCACGA TCATGCGGGT GTTCCTCATC AACGGAGCGC TGATCGGCCT CGTCGGCACG
GCGATCGGCC TCGTCGGCGG CGTGCTGTTC ACCCTCAACA TCAAGCCGAT CCAGCGCACC
CTGTTTCCCA CGGCCTGGGA CCCCACCGTG CGCTTCCTTG CCGAGATCCC GGCGGAGATG
AACACGAGCG AGGTCGTCAT CATCGTGATC ACCTCGATCC TGCTGTCGCT GGTGGCGACC
CTCTATCCCT CCTGGCGCGC CGCCCGGCTC GATCCGGTGC AGGCCCTGCG CTACGGCTGA
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| Protein sequence | MALALGKGGV SLRGALERLK NARASASTPP FAGFEWIIAG RYLRARRRGG GVSVVALFSV
LGIAVGVATL IIVLSVMNGF RTELRSKIIG LNGHVFAAPI DRLFTDYVDL SERLEKVAGV
RAVVPMVQGQ AFASSPYGGS GVLVRGVRES DLPKIPAVSG AIKSGTLEGF DDGQGVALGK
RLADALGLQA GDQVTLSTPK GASTPFGTAP RTKTYTVKAI FEIGVTDFDT TMAFMPLAEA
QAFFNRDGDV SVIEIYLDDA DAVGEMREPL EMAAERPVLL TDWRQTNRTF FGALEVERNV
MFLILNLIVI VATLNIISGL ILLVRDKSSD IAILRTMGAT PGTIMRVFLI NGALIGLVGT
AIGLVGGVLF TLNIKPIQRT LFPTAWDPTV RFLAEIPAEM NTSEVVIIVI TSILLSLVAT
LYPSWRAARL DPVQALRYG
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