Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1365 |
Symbol | |
ID | 7317857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1465407 |
End bp | 1466654 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616255 |
Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
Protein accession | YP_002513437 |
Protein GI | 220934538 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGTC CCCTCGAACT CTACATCGGC CTGCGCTACA CCCGCGCCAA GCGCCGCAAC CACTTCATCT CCTTCATCTC CCTGATCTCC ATGGCGGGGA TTGCCCTGGG GGTGACGGCG CTGATTACCG TGCTGTCGGT GATGAACGGC TTCGAGAAGG AACTGCGCGA GCGCATCCTG GGCATGGTCT CCCATGCCAC CATCAGCGAT TTCTCCGGTC GCCTGGCGGA CTGGCAGACC CTGGCGGCAC GCATCGAGGG CGAACCGCGG GTACTGGGCG CGGCGCCCTA CATCCAGGCC GAGGGCATGC TCCAGGGCCA GGGGCAGGTG AGCGGTGCCC TGATCCGCGG CATCCTGCCG GAGCGGGAGA AGCACGTCTC TCGGGTGGCC GAGCACATCA AGTTCGGCAG CATGGAGGCG CTGCGCGGCG GCGAGTACGG CGTGGTGCTG GGCAAGGAAC TGGCGGCGAG CCTGGGCGCC GGGGTGGGCG ACCGGGTGAC CCTGGTGACC CCCCAGGCCA CGGTCACCCC CGCCGGTGTG ATGCCCCGGT TGCGGCGCCT GCTTGTGGTG GGCGTGTTCG AGGTGGGCAT GTATGAATAC GACCGCAGCA CCGCCTTCAT GCACCTGGAT GACGCGCGCC GGGTGTTCCA GTACGAGGAC AACGTCACCG GGCTGCGCCT GAAGATGGAC GACATGATGC GCGCCCCCTT CATCGCCCGG GACGTGGCCG ATCGTCTGGG CGGGCGCTAC TGGGTCAGCG ACTGGACCCG CCAGCACGCC AACTTCTTCC GCGCCGTGCG CACCGAGAAG ACGGTGATGT TCATCATCCT GTCCCTGATC GTCGCCGTGG CTGCCTTCAA CATCGTCTCC ACCCTGGTGA TGGTGGTCAC CGACAAACAG TCGGACATCG CCATCCTGCG CACCCTGGGC CTGTCGCCCG CCTCGGTGAT GGGGGTGTTC ATGGTGCAGG GCACCCTGAT CGGCCTGGTG GGCACCGCCT TCGGCGTGGC GGGCGGCGTG ACGCTGGCGC TCAACGTGGA GACCATCGTG CCCGCCATCG AGCAGATGCT GGGCATGCAG TTCCTGCCCG CCGACGTCTA TTACATCAGT GACCTGCCCT CGGACCTGAA GGGCTTCGAC GTCATGCGGG TCGGCGTGCT GGCCTTCCTG CTCACGGTGC TGGCCACCCT TTACCCGGCC TGGCGGGCCT CCCGTACCCA GCCCGCCGAG GCCCTGCGCT ACGAGTGA
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Protein sequence | MFRPLELYIG LRYTRAKRRN HFISFISLIS MAGIALGVTA LITVLSVMNG FEKELRERIL GMVSHATISD FSGRLADWQT LAARIEGEPR VLGAAPYIQA EGMLQGQGQV SGALIRGILP EREKHVSRVA EHIKFGSMEA LRGGEYGVVL GKELAASLGA GVGDRVTLVT PQATVTPAGV MPRLRRLLVV GVFEVGMYEY DRSTAFMHLD DARRVFQYED NVTGLRLKMD DMMRAPFIAR DVADRLGGRY WVSDWTRQHA NFFRAVRTEK TVMFIILSLI VAVAAFNIVS TLVMVVTDKQ SDIAILRTLG LSPASVMGVF MVQGTLIGLV GTAFGVAGGV TLALNVETIV PAIEQMLGMQ FLPADVYYIS DLPSDLKGFD VMRVGVLAFL LTVLATLYPA WRASRTQPAE ALRYE
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