Gene Ppha_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0718 
Symbol 
ID6461464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp747261 
End bp748535 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content51% 
IMG OID642726975 
Productprotein of unknown function DUF214 
Protein accessionYP_002017630 
Protein GI194335836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA GAGATCAGGC GAGGATAGCT TTTGTGCATT TACGGGAGAG AAAACGCCAG 
ACACTCCTTA CGGCTCTTGG TGTTGCCGTT GGCTCGGCTA TGCTGGTGAC CACTATTGCC
GTATCACGGG GCTCCTCATC AAACGTGGTG GCCAAGGTTA TTGATACGGC GCCGCATGTG
GTGATCAGCG CAGAAAGGGT CGTGCCGCTG GTGCCTGACA ACATCATTGG GCAGCATGGG
GTCATGGTTT CGATGGTGAC GAAAAATATC AATCTGGATG AACAGGAGGT AATCAAGAAC
TATAGCGAGG TTATTGAGAG CATCAAGCCG GTCAAGGAGC TTCAGAGCAT CTCTCCTTTC
GTGCTCAGTA AAGTGATTGC CCGCAACAAA ACCCGCTTTA CTCCCTGTAT TGCCCGGGGT
GTCGTACCCC GTCTTGAGGC TGAGATAGCG GGGTTAAAGA AGAACCTGAT TGAGAAAAAT
GCCCTTGATG AGCTGGCCGC TACACCGAAT GGTGTGCTTG TCGGTGATCT TCTTGCAAAG
AAACTGAATG TCGGTTATCG CGACAGAATT GTGCTTGTGA CAAAAAACAG CGAAGAGTTC
CCTGTAACGC TAGTGGGACG TTTCAGCAGC GGTTTTAATG CAAAGGATGA ACGGGAGGCT
TATGTCAATC TCCCTTTTGC CCAGAGGATG GAGGGGATTG CCTCCAACTC AGTGAGTGGC
GTCGGACTGA GAACGGCGCA CGTTGAGCGT GCCCAGGAGA CCTCCGACAG AGTGGAAGCG
CTCAGTGGCT ATAAAAGCGA GAGTTGGGAT GAAACCAACC GGAATGTTAT TGAGTTTTAC
AACCGCAACG GACTGATTAC TCTGGTTCTT GTCGGGTTTG TTTTTATTGT GGCGGGTCTT
GGTGTCTCAT CTGTCATGAC GACAGTTATT TTGCAGAAAG TCAAGGATAT TGCCATCATG
CGTTCCATGG GTATGCCGGC GGGGAACATC ATGCGCATTT TCATGCTCGA AGGGTTTATG
ATTGGCCTCC TCGGAGTACT CATCGGCAGT CCTGCCGGCC ATCTCATCTG CAAGCTTGTT
GCCTCCATCC GTTTCGAGGC AAGCACGGCA GGAGTGCTGA AAAGTGACCG GATCAATCTT
ATCGAAATGC CTGACGCTCA TCTGATTGTG ATCGTTTTTG GTATCCTCAT TGCCGTGCTC
TCCTCATGGA GCCCGGCAAG AAAGGCGACA CGTTATGTTC CGGTCAGTAT TCTCAGGGGT
GAAGTCGGGG GTTAG
 
Protein sequence
MNYRDQARIA FVHLRERKRQ TLLTALGVAV GSAMLVTTIA VSRGSSSNVV AKVIDTAPHV 
VISAERVVPL VPDNIIGQHG VMVSMVTKNI NLDEQEVIKN YSEVIESIKP VKELQSISPF
VLSKVIARNK TRFTPCIARG VVPRLEAEIA GLKKNLIEKN ALDELAATPN GVLVGDLLAK
KLNVGYRDRI VLVTKNSEEF PVTLVGRFSS GFNAKDEREA YVNLPFAQRM EGIASNSVSG
VGLRTAHVER AQETSDRVEA LSGYKSESWD ETNRNVIEFY NRNGLITLVL VGFVFIVAGL
GVSSVMTTVI LQKVKDIAIM RSMGMPAGNI MRIFMLEGFM IGLLGVLIGS PAGHLICKLV
ASIRFEASTA GVLKSDRINL IEMPDAHLIV IVFGILIAVL SSWSPARKAT RYVPVSILRG
EVGG