| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1840 |
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| Symbol | |
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| ID | 6409499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1976362 |
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| End bp | 1977588 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711728 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001990841 |
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| Protein GI | 192290236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.487797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGCT GGCTGCCGTT TGAGTGGATT GCCGCGGTGC GGTTCCTGCT CGACGGCGCG
GTGCAGACGC TGGTGATCGT CGGCGGCATC GCGATCGGCG TCGGCGTCAT CGTGTTCATG
TCGGCGATGC TGGCGGGACT GCAGGCCAAT TTCATCAAGC GGGTGCTGAC ATCGGTGCCG
CAGATCCAAC TGCTGCCGCC GGATCAGGTA GCGCGGCCGC TGCGCGACCA GCCGGGCACG
GTCGAAGCCG CGGTGGTGCA GCGCCCGACC CAGCGGATGA TCTCGATCGA TCAATGGCCG
AAGATCCGCG CCGAGATGCA GGCGCGGCCC GACGTCGTCT ATGCCGCCGC CACCGCGTCC
GGTTCGGCGC TGGCGCTGCG CGGCGACACC AGCCGCGCCG TGACGTTGTA CGGCATCGAA
CCGGAGATCT ACTTCAAGAT CGTCAAGGTG CCGGATTTCA TCGTCGCCGG CGAGGCACAG
GTCACCACCG AGGGCATCCT GGTCGGCATC GAGCTGGCGC GCGACCTCGG CGCCTCGCTC
GGCGACAAGA TCATCGTGTC GACGCCGCTC GCGGGCAATC GCATCCTCAC CATCAAGGGG
ATCTTCGATT TCGGCAACAA GGCCGCCAAC CAGCGCAACA CCTTCGTCAC CCTGCGCAAT
GCCCAGAGCA TGCTGGGGCT GATCGGCGGC GTCACCTCGA TCGATCTGAC GGTGGAGGAC
ATCTATGCGG CGGAAACCAT CGCCCAGGAG ATACAGGCGA TGCTGCAGGT CAAAGCCGAC
AGCTGGATCA AGACCAATGC GCAGTTCTTC ACCGCGGTGC AGGCGCAGCA GAACTCCAAC
ACGCTGATCC GGCTGTTCGT CGGGCTGTCG GTGGCATTCG GCATCGCCGC GGTGCTGATC
GTGTCGGTGA TCCAGCGCTC CAAGGACATC GGCATCCTGC GCGCTATGGG GACCCGGCGC
GGGCAGATCC TGCGGGTGTT CCTGATCCAG GGCGGGCTGC TCGCCTTCGT TGGCTCGGTG
CTGGGCTCAG CGTTCGGCGC GCTGGCGCTG TTCACCTGGC ATCGCTCCGC CCGTCAGGTC
GACGGCAGCG AGTTGTTTCC GCTGATCCTA GATCCCGATC TGTTCGTCTG GGCGGCGGTG
CTCGCCACTG CGACCGGCGT CGCCGCGGCG ATCGCTCCGG CGCTGCGCGC CGCCAGGCTC
GATCCGGTGG TGGCGATCCG TGGCTGA
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| Protein sequence | MKRWLPFEWI AAVRFLLDGA VQTLVIVGGI AIGVGVIVFM SAMLAGLQAN FIKRVLTSVP
QIQLLPPDQV ARPLRDQPGT VEAAVVQRPT QRMISIDQWP KIRAEMQARP DVVYAAATAS
GSALALRGDT SRAVTLYGIE PEIYFKIVKV PDFIVAGEAQ VTTEGILVGI ELARDLGASL
GDKIIVSTPL AGNRILTIKG IFDFGNKAAN QRNTFVTLRN AQSMLGLIGG VTSIDLTVED
IYAAETIAQE IQAMLQVKAD SWIKTNAQFF TAVQAQQNSN TLIRLFVGLS VAFGIAAVLI
VSVIQRSKDI GILRAMGTRR GQILRVFLIQ GGLLAFVGSV LGSAFGALAL FTWHRSARQV
DGSELFPLIL DPDLFVWAAV LATATGVAAA IAPALRAARL DPVVAIRG
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