| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1366 |
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| Symbol | |
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| ID | 3756190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1385066 |
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| End bp | 1386292 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637782246 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_387862 |
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| Protein GI | 78356413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.217764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTG AGCTGTTTGT TGCGTTGCGT TATCTGTTTG CCCGCCGCAA GCAGACTTTC
ATTTCGGTCA TATCCGTCAT TTCGGTGCTG GGTGTGGCTC TGGGCGTGGC ATCGCTCATC
GTGGTGCTGG GCGTTATGAA CGGCTTCACC GTGGATATGC GTGAAAAGAT ACTGGGCGTG
AACGCCCATG TCATCACGCT GGCTGCGGGC GGCGGTATTT CCGGCTATCC TGAACTGGTG
CGCAAGGCCG AAACCGTTCC GGGAGTAAAG GGCGCGACCC CGTTCATTTA TTCCGAGGTC
ATGCTTTCGA CCCGCTACGG AGTCAAAGGT GTGGTGCTGC GCGGGGTGGA CCCCGTTTCG
GCGCCGGCGG TGCTGGGCAT TGCCGGCCGC ATGGTAGACG GTTCTCTGGC CGACCTTGAA
CGATCCGGTG CGCCGGGTCT TGTCATCGGT AAAGAACTGG CCAAACGGCT GGGTATCACC
GTGGGCAGCA GGGTCAACCT GCTGTCTCCT TCGGGCGAAA AAACAAGCGC GGGGTTTACC
CCGCGCATCC TTTCTTTCAA GATCGCAGGT ATTTTTTCTA CCGGCATGTT CGAGTATGAC
TCGTCGCTGG GGTTCGTCTC GCTTGATGCC GCCCGTGATC TGCTGGGAAT GCCTGCTGGC
ACTGTTTCTG GTCTTGAAAT AGTGGTGGAT GACATTTACC GCGCCGATAC CGTGGCGCAG
GCGGTTACTC AGGCTCTGGG CGGGTATCCT TTTTACAGCC GCAACTGGAT GGAAATGAAT
GCCAACCTTT TTGCGGCGCT CAAGCTGGAA AAAGCTGCCA TGTCCATCAT GCTCACCCTC
ATAGTGCTGG TGGGGTCTTT TTCCATTGTC ACCACACTGG TGATGCTGGT TATGGAAAAA
TCGCGCGATA TCGCCATCAT GATGTCCATG GGCGCTACAA AATCACATAT CCGGCGCATT
TTCATGCTGC AGGGTACTAT CATAGGCGTT GTGGGCACCA CTCTGGGATT CGGGCTGGGG
CTGCTTGTGT GCTGGCTGCT CAAGCGTTAT CAGTTCATCA AACTGCCGCC CGGCGTCTAT
TCGCTTGACC ATCTGCCCGT GCTGCTGCAG TGGCAGGATC TGGCAGCCAT TGCCGTCGGT
GCCATGGTGC TGTGCTTTCT TGCCACCATC TATCCTGCGC GGCAGGCGTC TTCACTGGAG
CCTGCCGAGG CGCTGCGGTA CGAATGA
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| Protein sequence | MRFELFVALR YLFARRKQTF ISVISVISVL GVALGVASLI VVLGVMNGFT VDMREKILGV
NAHVITLAAG GGISGYPELV RKAETVPGVK GATPFIYSEV MLSTRYGVKG VVLRGVDPVS
APAVLGIAGR MVDGSLADLE RSGAPGLVIG KELAKRLGIT VGSRVNLLSP SGEKTSAGFT
PRILSFKIAG IFSTGMFEYD SSLGFVSLDA ARDLLGMPAG TVSGLEIVVD DIYRADTVAQ
AVTQALGGYP FYSRNWMEMN ANLFAALKLE KAAMSIMLTL IVLVGSFSIV TTLVMLVMEK
SRDIAIMMSM GATKSHIRRI FMLQGTIIGV VGTTLGFGLG LLVCWLLKRY QFIKLPPGVY
SLDHLPVLLQ WQDLAAIAVG AMVLCFLATI YPARQASSLE PAEALRYE
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