| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3743 |
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| Symbol | |
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| ID | 4457910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4574002 |
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| End bp | 4575234 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704517 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_847848 |
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| Protein GI | 116751161 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG AACTTTTCGT CAGTTTGCGC TATCTTTTCG CAAAACGGCG CCAGACGTTC
ATTTCGCTGA TCACCTTGAT TTCCATCGCG GGGGTGGCGG TGGGCGTAAC GGCGCTCATC
GTGGTCCTGG CCGTGATGAA CGGCTTCCAG GAAGATCTGC GCAACCGGAT TCTCGGAGTG
ACGTCGCACG TGGTGGTGGG GAGCCTCACG GGGGCGATGA ACAACTACCC GGACGTTATC
GCCAAAGTGG AAAAGGAGCC GGGGGTCGTC GCCGCCGCGC CGTTCGTCTA CAGCCAGGTC
ATGCTCACCT CCGGACGGGG CATTTCGGGG GCCATCCTTC GAGGCATCGA CCCTTTGTCC
GCCTCGAAGG TCATCCGGCT CCAGGAAAAC ATGATCGGCA ACCTGGCGGA TCTCTCGTCG
CCGCGTGGGG ACGCCGATGC CCCGCCGGCG ATCATCCTCG GATCGGAACT GGCCGGCAAT
CTCGGGGTCA GGACCGGGGA CTGGGTCACC ATGATTTCCC CGACCGGCCG GCTGACGCCG
ATGGGGCAAA CCCCCAAGAG CAAGCTTTTC CAAGTGGTGG GGATGCTGCA ATCGGGGATG
TACGAGTACG ATAATACCCT TGTCTACGTG GACCTGCCGG CCGCCCAGCA GTTCCTGGGA
ATCGGGGATA CGGTGACGGG GGTCGAGATC CGCCTGCAAG ACATCTACGA GGCGGCAAAG
GTGTCCGAGT CCCTGCGTGA GCGGCTCGGC GCCCCCTACT GGGCGCGCGA CTGGATGCAG
ATGAACCGGA GCCTCTTCTC GGCGCTCAAA CTGGAAAAGG TCGTCATGTT CGTCATCCTG
ACCCTGATCA TCCTGGTGGC CGCTTTCAAC ATCGTGAGCT CGCTGATCAT GCTGGTCATG
GAGAAGGGGC GCGACATCGC GATCCTCAAG GCCATGGGGG CGACCACGGC CAGCATTCGC
AAGATTTTCG TGCTGGAAGG ATTGATGATC GGCGTCTCGG GCACGATCCT CGGGCTGCTC
GGGGGATTCG GCCTTTGCGG AATACTGGAA CGTTACAAGT TCATCGATCT GCCGCCGGGC
ATTTATCACA TTTCCAAGCT GCCCGTGAAA ATCGAGGGGT CCGACGTGGC GTTCATCGCT
CTGGCGGCGA TCATGATCAG CCTCATCGCG ACGCTTTATC CGTCGCGGCA GGCGGCCAAG
CTGGATCCGG CGGAAGCGCT TCGATATGAA TAA
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| Protein sequence | MNFELFVSLR YLFAKRRQTF ISLITLISIA GVAVGVTALI VVLAVMNGFQ EDLRNRILGV
TSHVVVGSLT GAMNNYPDVI AKVEKEPGVV AAAPFVYSQV MLTSGRGISG AILRGIDPLS
ASKVIRLQEN MIGNLADLSS PRGDADAPPA IILGSELAGN LGVRTGDWVT MISPTGRLTP
MGQTPKSKLF QVVGMLQSGM YEYDNTLVYV DLPAAQQFLG IGDTVTGVEI RLQDIYEAAK
VSESLRERLG APYWARDWMQ MNRSLFSALK LEKVVMFVIL TLIILVAAFN IVSSLIMLVM
EKGRDIAILK AMGATTASIR KIFVLEGLMI GVSGTILGLL GGFGLCGILE RYKFIDLPPG
IYHISKLPVK IEGSDVAFIA LAAIMISLIA TLYPSRQAAK LDPAEALRYE
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