Gene Caul_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2978 
Symbol 
ID5900433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3235698 
End bp3236957 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID641563475 
Producthypothetical protein 
Protein accessionYP_001684603 
Protein GI167646940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.231225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA CCTCCTCCGT CCTTGGCGAG GTGGCCCTGG CCCACCTTCG GGTCCGCGCC 
CGCCAGACCC TGGTGGCGAT GCTCGGCGTG GCGATCGGCG TCGGGTTCTT CCTGGCCGTG
TCGGGCATGA TGGTCGGTTC GCAGAAGGAC TTTATCCGCA CACTGATCGA CTCCACGCCG
CACATCATCG TACACGATGA ACAACGCGCG CCCACCCGCC AGCCCGTCCT CGACGCTTTC
CCGGAGGCGG CCGTCTCGAT CCGCGGCCTG CGACCGCAGG AAGAGGTGCG CGGCCTGAAG
GACTGGCCGG CCATGCTGGT CGACGCCCGG GCGATTCCTG GCAGTCTGGC GGCGCCGTCC
CTGACGGGCG CCGTGACGAT CGCCTATGCC GGGCGGACCG CGGCGGTGGC CTTGAACGGC
GTTGACCCGC GGATCGAAGG CCGGCTGGCG AAAATCGACG AAAGCCTGGT TGGCGGCGTG
CTGGCCGACC TGGAGGCGCG TCCGGACGGC CTGATCATCA GCCGCCCCCT CGCCGACCGG
CTTGGCGCGC ACATGGGCGA CACCCTGGTG GTGACGGCGC CGGCCGGGGC CTTGCAGCGC
ATGCGCATCC TGGCCCTGAT CGAGCCGGAC GCTCAAGCGG GGTTCTACGC GGGCGACACC
GTCGCCTACG GCCTTCTGCG CACGGCGCAG GTGCTGTTCT CCCGGCCCAA CATCGTCAAC
CAGATCCATA TCCGGCTGGC GCAGTCCGAT CAGGCCCAGA TCCAGGCCAC GCGACTGGAG
ACGCGGTGGG GCTACAAGTG GGAATCCTGG CAGGAGCGCT CGGCCGACAT CCTCAACCTG
CTGACGGTGC GCAACGTCAT CATGTACGCG GTGATCTCGG CGATCCTGGT GGTGGCCAGC
TTCGGGATCT ACACGGCCGT CTCCAACAGC GTCGCCGACA AGCGGCGCGA CATCGCCATC
CTGCGCGCGA TGGGCTTCAC GGCAGGGGAT GTCGAAACGA TCTTCCTGAT CGAGGGCCTG
CTGGTCGGCG TCCTGGGCGC GCTGGTGGGG TTCGCCTTGG GGACGGGCCT GCTCGACGCC
CTGGCCAGCG TGCCGCTTTC GATGGGCGGC AAACCCCTGG TCCTGCCCCT CGATCGGGGT
CTTCAGCAGT ATCTGGTCGC TGGGGGAGCC TCCCTCGGCG CGGCTCTTGT CGCCGCCTGG
CTGCCGGCCC GGAAGGCCGC CGGGGTCGAC CCGGTGGCGA TCCTGCGAGG CGCGGCGTGA
 
Protein sequence
MSLTSSVLGE VALAHLRVRA RQTLVAMLGV AIGVGFFLAV SGMMVGSQKD FIRTLIDSTP 
HIIVHDEQRA PTRQPVLDAF PEAAVSIRGL RPQEEVRGLK DWPAMLVDAR AIPGSLAAPS
LTGAVTIAYA GRTAAVALNG VDPRIEGRLA KIDESLVGGV LADLEARPDG LIISRPLADR
LGAHMGDTLV VTAPAGALQR MRILALIEPD AQAGFYAGDT VAYGLLRTAQ VLFSRPNIVN
QIHIRLAQSD QAQIQATRLE TRWGYKWESW QERSADILNL LTVRNVIMYA VISAILVVAS
FGIYTAVSNS VADKRRDIAI LRAMGFTAGD VETIFLIEGL LVGVLGALVG FALGTGLLDA
LASVPLSMGG KPLVLPLDRG LQQYLVAGGA SLGAALVAAW LPARKAAGVD PVAILRGAA