Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1065 |
Symbol | |
ID | 5832483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1161145 |
End bp | 1162464 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641366860 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_001638541 |
Protein GI | 163850498 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.123078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTG CGTTGGGTAA GGCCGGTGTT TCCTTGAAGG GCGTCCTCGC ACGGCTGAAG AACGCCCGCG CGAGCGCCTC CACGCCGCCC TTCGCGGGGT TCGAGTGGAT CATCGCCGGG CGCTACCTGC GGGCGCGCCG CCGGGGCGGC GGCGTCTCGG TGGTGGCCCT GTTCTCCGTG CTCGGCATCG CGGTGGGTGT GGCCACCCTC ATCATCGTGC TCTCGGTGAT GAACGGCTTC CGCTCGGAAC TGCGCTCCAA GATCATCGGG CTCAACGGCC ACGTCTTCGC CGCGCCGATC GACCGGCTGT TCACCGACTA CGTCGATCTG TCCGACCGGC TGGAAAAGGT CGCGGGCGTG CGCGCCGTGG TGCCGATGGT GCAGGGGCAG GCCTTCGCCT CCTCGCCCTA TGGCGGCTCC GGCGTGCTGG TGCGCGGCGT GCGCGAATCC GACCTGCCGA AGATCCCCGC CGTCTCGGGC GCGATCAAGG GCGGGACGCT CGAAAACTTC GACGACGGCC AGGGGGTGGC GCTCGGCAAG CGGCTCGCCG ACGCCCTTGG CCTGCAGGCG GGCGATCAGG TGACGCTCTC GACGCCGAAG GGCGCGAGCA CGCCGTTCGG CACCGCCCCG CGCACCAAGA CCTACGCCGT CAAGGCGATC TTCGAGATCG GCGTGACCGA TTTCGACACC ACCATGGCCT TCATGCCGCT GGCGGAGGCG CAGGCCTTCT TCAACCGCGA CGGCGATGTC AGCGTGATCG AGATCTATCT CGACAACGCC GACGCGGTGG GCGAGATGCG CGAGCCCCTG GAGATGGCGG CCGAGCGTCC GGTGCTGCTC ACCGACTGGC GCCAGACCAA CCGCACCTTC TTCGGGGCGC TGGAGGTGGA GCGGAACGTG ATGTTCCTGA TCCTCAACCT CATCGTGATC GTTGCGACCC TCAACATCAT CTCAGGGCTC ATCCTGCTCG TGCGGGACAA GTCCTCGGAC ATCGCGATCC TGCGCACCAT GGGGGCGACG CCGGGCACGA TCATGCGGGT CTTCCTCATC AACGGGGCGC TGATCGGCCT CGTTGGCACG GCGATCGGGC TGATCGGCGG GGTGCTGTTC ACCCTCAACA TCAAGCCGAT CCAGCGCACC CTGTTTCCCA CCGCCTGGGA CCCGACCGTG CGCTTCCTCG CCGAGATTCC GGCCGAGATG AACACGAGCG AGGTCGTCAT CATCGTGATC ACCTCGGTGC TGCTGTCGCT GGCGGCGACC CTCTATCCCT CCTGGCGCGC CGCCCGGCTC GATCCGGTGC AGGCCCTGCG CTACGGCTGA
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Protein sequence | MALALGKAGV SLKGVLARLK NARASASTPP FAGFEWIIAG RYLRARRRGG GVSVVALFSV LGIAVGVATL IIVLSVMNGF RSELRSKIIG LNGHVFAAPI DRLFTDYVDL SDRLEKVAGV RAVVPMVQGQ AFASSPYGGS GVLVRGVRES DLPKIPAVSG AIKGGTLENF DDGQGVALGK RLADALGLQA GDQVTLSTPK GASTPFGTAP RTKTYAVKAI FEIGVTDFDT TMAFMPLAEA QAFFNRDGDV SVIEIYLDNA DAVGEMREPL EMAAERPVLL TDWRQTNRTF FGALEVERNV MFLILNLIVI VATLNIISGL ILLVRDKSSD IAILRTMGAT PGTIMRVFLI NGALIGLVGT AIGLIGGVLF TLNIKPIQRT LFPTAWDPTV RFLAEIPAEM NTSEVVIIVI TSVLLSLAAT LYPSWRAARL DPVQALRYG
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