| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2233 |
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| Symbol | |
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| ID | 8420090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2536002 |
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| End bp | 2537231 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038833 |
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| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
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| Protein accession | YP_003199095 |
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| Protein GI | 258406353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTG AACGATTTAT CGCGGTGCGC TATCTCCTGG CGCGACGCAA GCAGACTTTT
ATTTCCGTGA TTTCCCTGAT CTCGGTCCTC GGCGTCGGGC TCGGCGTGGC CGCGCTGATT
GTTGTCCTGG GGGTCATGAA CGGGTTCAGC AATGAATTGC GGGACAAGAT CCTCGGGGTC
AACGCCCACG TGATCGTCGG CGCCACGAGC GGCGGGTTTG CCGATTATGA GCAGACGGCC
GAGACCGTTC GCCGCGTCCA GGGTGTGACC GGTGTCATGC CCTTTATCTA TTCCGAAGTC
ATGTGCAGCA CGCCCCACGG CGTCAAAGGG GCCGCCTTGC GAGGAATCGA CCCCGAGCGG
GCGCCGGAGG TCTTGAACCT TGGCGAACAA ATGGTTCAAG GCTCGCTTCA GGCGCTCACG
GAACCCGGAG AGTATCCCGG GATCATCCTC GGTCAGGACC TGGCGGATCG CCTCGGCGTG
TTTAGCGGAC GAACCATCAA CCTCCTTTCT CCCAGCGGGC AATCTTCCGC AGCGGGATTT
TCTCCAAAAA TCAAGATTTT TCGAGTTGTG GGCGTCTTCG AATCCGGCAT GTACGAATAC
GATTCGTCCC TGGCCTATGT CGGACTCCCG GCGGCCCGGG ATCTTCTGGG GTTCGGCGGC
GAGTTGGTCA CCGGTCTCGA GGTGCGTCTG GCTGATGTCT ACCAAGCCCC CCAGATCGGG
GAGGCGGTCC TTGAACGGCT GGACCCGTCG CGATTCTATG TCCGCAACTG GATGGAGATG
AATGAGAGCT TTTTTTCAGC CTTGAAGCTC GAAAAGACGG CCATGTCCGT TATTCTGGTC
ATGATTGTTC TGGTGGGGTC GTTTAGCATC ATCACCACAT TGATCATGCT GGTTATGGAA
AAAACCAAGG ATATCGCGAT ACTTATCTCC ATGGGTGCAC AGGCACACAA TATCCGCAAT
ATCTTCATGC TCCAGGGGAC GATCATCGGT TTCGTCGGGA CCGGGCTTGG TTATGCGCTC
GGACTGGGGG TCTGTTTTCT CCTGGACCGG TACCAATTTA TCCGCTTACC GGGGGACGTG
TATTATCTGG ACCACTTGCC CGTGCAATTG GAGTGGCTGG ATATGGGGCT TATCGGAGTC
GCCGCGCTGG GATTGTGCTT CCTGGCCACC TTGTACCCGG CGCGTCAGGC GTCACGTCTG
GAACCGGCGG AGGCCCTACG CTATGAATAG
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| Protein sequence | MGFERFIAVR YLLARRKQTF ISVISLISVL GVGLGVAALI VVLGVMNGFS NELRDKILGV
NAHVIVGATS GGFADYEQTA ETVRRVQGVT GVMPFIYSEV MCSTPHGVKG AALRGIDPER
APEVLNLGEQ MVQGSLQALT EPGEYPGIIL GQDLADRLGV FSGRTINLLS PSGQSSAAGF
SPKIKIFRVV GVFESGMYEY DSSLAYVGLP AARDLLGFGG ELVTGLEVRL ADVYQAPQIG
EAVLERLDPS RFYVRNWMEM NESFFSALKL EKTAMSVILV MIVLVGSFSI ITTLIMLVME
KTKDIAILIS MGAQAHNIRN IFMLQGTIIG FVGTGLGYAL GLGVCFLLDR YQFIRLPGDV
YYLDHLPVQL EWLDMGLIGV AALGLCFLAT LYPARQASRL EPAEALRYE
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