Gene Paes_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0385 
Symbol 
ID6459258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp417130 
End bp418398 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content50% 
IMG OID642724383 
Productprotein of unknown function DUF214 
Protein accessionYP_002015089 
Protein GI194333229 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0295868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0668384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA CCCTTGTGAC GATAGCGATC CGTCACCTTG CCGGAAGAAG ACGGCAGACG 
ATAACGACAG TGACTGGCGT TGCGGTCAGC ACTATGGTTC TGATTACGAC CATTTCGCTG
ACCAGAGGCC TTCTTGATTC ATTTGTCGAA ACGATTGTTG ATGTCGCCCC CCACATTACC
CTGAAAGGCG AGCTGGTGAA CCCTCTTCCG CTCAACCTTC TCGATGGCGA GGCTGTTGAC
CGATATGCTT TTGTGGTGGA AAATATTCAG AAAGAGGATC GCGATGAGGT TCAGCACTAC
CGCCAGATCC TTGAGTCGCT GCTTGTCCCT CCATTCAGCA GGGAGATTCT TGTTTCGTCG
CCCTATGTCG AATCCCAGAT TATGATTATT AATGGTAATC GCAACCTGCC GGTTTTGCTC
AAAGGCGTCG ATATTGATCG TGAAGAGGGT ATAAGCGGTC TGAAGGAGAA GCTTACAGAG
GGAAGTGTAG AAGCGTTCAG AAAAACCCCT GGTGCTCTGC TTGTCGGCAG AACCGTTGCC
CGCGATCTTG ATATCGCGCT CAATGATGAG GTGACTGTTG TTCCCGCTTC GGGGCCGTCA
CGGCAGTGTA AGGTCACCGG AATTTTTTTT TCCGGTGTCA ATGCTGTCGA TAACAGTGTT
TTTGCGACGC TTAAATTTGG CCAGATTATC GAAGGCCTTC CGGCTGACAA GGTATCGGGT
ATAGCAATGA AAGTGAGCGA TCCGCTCGAT AATGGGGGTA TTGCAGGAGA CCTTGAACGA
ATAACGGGGT ATTCCTCGGC GACCTGGCAG GAGGAGAATG CCAATGTTCT ATCGCTTTTC
ACCCGAATTG GTTACATCGT TTTCTCACTG GTTGCTTTTG TTGGTGTTGT TTCCGGCTTC
GGCGTGGCAA ATATTCTGGT TACCACTGTT TTTGAAAAGA GCCGTGATAT AGCGATCATG
AAATCCTTTG GATTTTCAGC AGGATCTCTG GTGTTTATGT TTATTCTCGA AGGGTTTCTT
GTGGGGTGTG GTGGAGCATT GGCCGGAGGG CTGCTTTCGG TTGGCACCAT CAATCTTCTT
GCAAGCATTC CGGTCGAGAC ATCCCAGGGG CCGTTGACAA AAACAGGTTT CAGCATGTCC
TGGAACCCCT GGTATTTCTT TTTCGTGATT CTCGTTACTG TTCTGATCAG TACCATCGCC
GCTATGATTC CATCTGCCAG GGCGGCAGGC CTTGAGCCGG TCAAGGTGCT GCGCGACAGC
AGTTTATAA
 
Protein sequence
MLRTLVTIAI RHLAGRRRQT ITTVTGVAVS TMVLITTISL TRGLLDSFVE TIVDVAPHIT 
LKGELVNPLP LNLLDGEAVD RYAFVVENIQ KEDRDEVQHY RQILESLLVP PFSREILVSS
PYVESQIMII NGNRNLPVLL KGVDIDREEG ISGLKEKLTE GSVEAFRKTP GALLVGRTVA
RDLDIALNDE VTVVPASGPS RQCKVTGIFF SGVNAVDNSV FATLKFGQII EGLPADKVSG
IAMKVSDPLD NGGIAGDLER ITGYSSATWQ EENANVLSLF TRIGYIVFSL VAFVGVVSGF
GVANILVTTV FEKSRDIAIM KSFGFSAGSL VFMFILEGFL VGCGGALAGG LLSVGTINLL
ASIPVETSQG PLTKTGFSMS WNPWYFFFVI LVTVLISTIA AMIPSARAAG LEPVKVLRDS
SL