Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3567 |
Symbol | |
ID | 4072789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 4217070 |
End bp | 4218341 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637985590 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_592642 |
Protein GI | 94970594 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.756596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATTCG AACTCTTCAT CGCGACCCGC TATCTCCGCG CCAAGCGCCG TCAGGCGGTC ATCGGCGTCA TCACCGGGAT CTCCATCATC GGCGTGGCCG CCGGCGTCGC ATCGCTCATC ATCGCGCTCG CGATCAATAA CGGTTTCCGT TCCGATCTCC AGGCGCGTCT GCTCGGCTCC ATGTCGCACA TCAACCTCAT GCGTCTGCAA AACGACGGCA TCAAGAACTG GCGCGATCTT CTTGCGAAGC TGGAAAAGCA GCCGCACGTC GTCGCCGGAG CTCCCGCGAT CTACGAACAG GTCTTGATTT CCCGCGGCGC ACGCGCACAA GGCGCACTCC TCAAGGGCAT CGTTCCCGCC GATGAACGCC GCGTCAGCGC GCTACTCGAC AACGTGAAAT TCGGATCCGC CGACGCTCTC GATTCCTCGC AGAACGGCGA AGGCGCGCCC AAGACGCTCT CCGACGAAGT CACGCAATCC CTGCCGCCGA TCGTCCTAGG CAAAGATATG GCCGACACCC TCGGCGCAAC CACCGGCTCG GTCGTGCTCG TCACCAGCCC GCAAGGCGAA CTGACCCCCT TCGGCATCGT GCCGAAATAC CAGCGCTTCA AGGTTGTCGG GATCTTCGAG TCCGGCTTCT ACGACTACGA CTCTTCCTGG GGCCTGACCC GTCTTGACGA CGCGCAAAAA CTCTTTGGCC TTGGTGACAT CGTCCCCGTC CTGGAATTCA AAGTAGATGA CATCTATAAA GCCCCGCAGA TCGCCGACCA ACTCGTCGAC GTCGCCGGCC AGGGCTTCGG CGCCAAGAAC TGGATGGAAC AGAACCAGGC GCTCTTCCGC GCGCTCCGCC TTGAAAAAGT CGTGACTTTC ATCACCATCG GCCTGATCGT GTTCGTCGCC GCGCTCAACA TCCTCATCTC GCTCATCATG ATGGTGATGG AGAAGACGAA AGACATCGCC GTCCTCGTCT CCATCGGCGC ACGCCGCCTG CAAATCCGAC GCATCTTCAT GCTGCAAGGC GTGCTCGTCG GCGCGGTCGG CACCCTTATC GGTTTGGTCC TCGGCTTCGG CCTCGCCATC GCCGCCGGCC ACTACCACTG GATCCGCCTC TCCGCCGAGG TCTACGCCAT CGACTACGTC CCCTTCGCCC CCCGCCTCAT CGACGGCCTA GTCGTCTCCG TTGTCTCCAT CGCGATCAGC TTCATCGCGA CAATCTACCC CGCGATGAAC GCGTCGCGCG TGCTCCCCGC CGAAGCCCTG CGCTACGAAT AG
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Protein sequence | MKFELFIATR YLRAKRRQAV IGVITGISII GVAAGVASLI IALAINNGFR SDLQARLLGS MSHINLMRLQ NDGIKNWRDL LAKLEKQPHV VAGAPAIYEQ VLISRGARAQ GALLKGIVPA DERRVSALLD NVKFGSADAL DSSQNGEGAP KTLSDEVTQS LPPIVLGKDM ADTLGATTGS VVLVTSPQGE LTPFGIVPKY QRFKVVGIFE SGFYDYDSSW GLTRLDDAQK LFGLGDIVPV LEFKVDDIYK APQIADQLVD VAGQGFGAKN WMEQNQALFR ALRLEKVVTF ITIGLIVFVA ALNILISLIM MVMEKTKDIA VLVSIGARRL QIRRIFMLQG VLVGAVGTLI GLVLGFGLAI AAGHYHWIRL SAEVYAIDYV PFAPRLIDGL VVSVVSIAIS FIATIYPAMN ASRVLPAEAL RYE
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