Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_6489 |
Symbol | |
ID | 8548906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 8911751 |
End bp | 8912971 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646391152 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003270851 |
Protein GI | 262199642 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGC CCTGGTTTTT GGCCGTGCGC TTTCTGCGCG AGGGCCGCAT GCAGACGCTG CTGATCGTGG TTGGCGCCGG CGCCGGCGTC ACCGTGATCG TGTTCCTCTC GGCCCTGATC GGCGGGCTGC AAGAGAACCT CATCGCCAAG ACCCTGGGCA CGCAGGCGCA CGTGGTCATC CGCCCGCCCG AGGAGGTGGC GCGGCCGCTG CTCGCGCGCG ACGCCGGCGC GGTGGTGATC AGCCGGGTCG AGCGCCCGGC CCAGCGCATC CGCTCGATCG ACGGCTGGCA GCGGCTCACG CGCGCGCTTG AGCGCACGCC GGGGGTGAGC GCGGTCTCGC CCACGGTCTC GGGGCCGGCC TTTGCCACCC GCGGCAACGC CGAGAAGTCG GTGGTGCTGT ACGGCGTCGA GGCCGCGCGC TTCGACGCCA TCATCGGCAT CCGCGCGGCC ATGATCGCGG GCGAGTTCCG CGTCGGCGGC ACCGAGCTGG TCATCGGCAG CGAGCTGGCC GACGACCTCG GCGTCGCCCT CGGCGACAAG CTGCGCATCC AGGGCACAGC CGGCCGCAGC CAGCTCTTCG CGATCGCCGG CGTCTTCGAC CTGGGCGTGC GCGACGTTAA TCGGCGCTGG GTGATCGCGT CGACGCGCGC GGCCCAGACC CTGCTCGACC TGGTCGGCGG CGCCTCGACC ATCGACCTGC GCGTGGCCGA GATCTTCGCC GCCGAGGACA TCGCCCGGCG CATCGAGGCG CGCACCGGGC TGGTGGTCGA GAGCTGGATG CAGACCAACG CCGAGCTGCT CACGGCGCTG CGCTCGCAGT CGAGCTCGAG CACGATGATC CAGGTGTTCG TGATCATCGC CGTGGCCATC GGCATCGCCA GCGTGCTGGT GGTCTCGGTG GTGCAGAAGT CGCGCGAGAT CGGCATCCTG CGCGCCATGG GCACGGACCG CCGCACGGTG CTGGCGACCT TTCTCATCCA GGGCGGCATC GTCGGCGCGC TGGGCTCGGC CATCGGTATC GCCGGCGGCG CGGGCCTGGG CTGGCTGTTC GTGAGCCTGG CGCGCAACGC CGACGGCTCG CCGCTGTTTC CCATCGCGTT TGGCGCCGAG CTGATGATCA CGGCCGCGCT GGTGGCCACA GGCACGGGCA TCGCCGCGGC CGCCTTGCCC GCCCGCCGGG CCGCGCGCCT CGACCCCGCC GAGGCCATCC GCAATGCCTG A
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Protein sequence | MLLPWFLAVR FLREGRMQTL LIVVGAGAGV TVIVFLSALI GGLQENLIAK TLGTQAHVVI RPPEEVARPL LARDAGAVVI SRVERPAQRI RSIDGWQRLT RALERTPGVS AVSPTVSGPA FATRGNAEKS VVLYGVEAAR FDAIIGIRAA MIAGEFRVGG TELVIGSELA DDLGVALGDK LRIQGTAGRS QLFAIAGVFD LGVRDVNRRW VIASTRAAQT LLDLVGGAST IDLRVAEIFA AEDIARRIEA RTGLVVESWM QTNAELLTAL RSQSSSSTMI QVFVIIAVAI GIASVLVVSV VQKSREIGIL RAMGTDRRTV LATFLIQGGI VGALGSAIGI AGGAGLGWLF VSLARNADGS PLFPIAFGAE LMITAALVAT GTGIAAAALP ARRAARLDPA EAIRNA
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