| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2994 |
|---|
| Symbol | |
|---|
| ID | 7174938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3778368 |
|---|
| End bp | 3779621 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643541529 |
|---|
| Product | lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| Protein accession | YP_002437399 |
|---|
| Protein GI | 218888078 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCG AACTGTTCGT GGCCTTGCGC TACCTGTTCG CACGTCGCAG GCAGACCTTC
ATCTCCGTCA TTTCCGTCAC CTCCATTCTG GGGGTGGCGC TGGGGGTGGC GTCGCTGATC
GTGGTGCTGG GCGTCATGAA CGGCTTCACC ACCGACCTGC GCGACAAGAT CCTGGGCGCC
AACGCCCACG GCATCGTCAT GTCCGCTGAC CGTTCCGGCC TTGGCGACGC GCCGCAGCTC
ATCGACAAGA TCCGGCAGGT GGACGGGGTG CGCGGTGCGA CACCCTTCAT CTATTCCGAA
GTCATGCTTT CCACCCCCCA CGGAGTTAAG GGCCTGGTGC TGCGCGGCAT AGACCCGCAG
TCCGCCCCGT CGGTGCTGGG CATCCTTTCC AACATGACCA AGGGCAGCGT GGCCGACCTT
GCGCCGCACA CAGGTGCCGA CGGCGCCTAC TCCGGCCCGC CCGGCGTGAT CATCGGCGAC
GAACTGGCGC AGCGCCTGGG CGTGGTGGTG GGCAGCCGGG TGAACCTGCT GTCGCCCGCC
GGGCAGAAGA CCTCCGCCGG GTTTGCCCCG CGCATCCGTC CCTTCATGGT GGTGGGCGTG
TTCTCCACCG GCATGTTCGA GTACGATTCC TCGCTGGGGT TCGTGTCGCT GGACGCCGCG
CGCGACGTGC TGGGCCTGCC CGACGGCGCC GTTTCGGGCG TGGAGCTTGC CGTCACCGAC
GTGTACAAGG CGGACCAGGT GGCCGAACGG GTCACCCGCG CCGTGGGCGG CTACCCGCTG
TACACCCGCC ACTGGATGGA GATGAACGCC AACCTGTTCG CCGCGCTGAA GCTGGAAAAG
ACGGCCATGG CCGTGATTCT GGTACTCATC GTGCTGGTGG GCTCGTTTTC GATCATCACC
ACGCTGGTCA TGCTGGTCAT GGAAAAGACG CGCGACATCG CCATACTCAT GTCCATGGGA
GCCACGCGGG GCATGATCCG GCGCATCTTC ATGCTTCAGG GCACGGTCAT CGGGGCCATC
GGCACCGGTC TTGGCTATGT GCTGGGGCTG GGCGTGGCGG AACTTCTGAA ACGCTACCAG
TTCATCAAGC TGCCGCACGG CGTCTATTCG CTGGACCACC TGCCGGTGCT GCTGCAATGG
CCCGACATGC TGGCCATCGG CGCAAGTTCG ATGCTGCTGT GCTTCGTCGC CACCATCTAC
CCGGCGCGCC AGGCTGCCAG CCTGGAACCC GCCGAAGCGC TGCGCTACGA ATGA
|
|---|
| Protein sequence | MSFELFVALR YLFARRRQTF ISVISVTSIL GVALGVASLI VVLGVMNGFT TDLRDKILGA
NAHGIVMSAD RSGLGDAPQL IDKIRQVDGV RGATPFIYSE VMLSTPHGVK GLVLRGIDPQ
SAPSVLGILS NMTKGSVADL APHTGADGAY SGPPGVIIGD ELAQRLGVVV GSRVNLLSPA
GQKTSAGFAP RIRPFMVVGV FSTGMFEYDS SLGFVSLDAA RDVLGLPDGA VSGVELAVTD
VYKADQVAER VTRAVGGYPL YTRHWMEMNA NLFAALKLEK TAMAVILVLI VLVGSFSIIT
TLVMLVMEKT RDIAILMSMG ATRGMIRRIF MLQGTVIGAI GTGLGYVLGL GVAELLKRYQ
FIKLPHGVYS LDHLPVLLQW PDMLAIGASS MLLCFVATIY PARQAASLEP AEALRYE
|
|---|
| |