More than 300 homologs were found in PanDaTox collection
for query gene Plim_2032 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  100 
 
 		 383 aa  793    Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  62.77 
 
 		 376 aa  488  1e-137  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  56.91 
 
 		 374 aa  440  9.999999999999999e-123  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  57.03 
 
 		 374 aa  439  9.999999999999999e-123  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  56.76 
 
 		 374 aa  438  1e-121  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  57.29 
 
 		 374 aa  436  1e-121  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  56.91 
 
 		 373 aa  435  1e-121  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  57.91 
 
 		 369 aa  431  1e-119  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  56.68 
 
 		 372 aa  429  1e-119  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.352304 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  56.95 
 
 		 386 aa  429  1e-119  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal  1 
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  57.72 
 
 		 373 aa  429  1e-119  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  56.28 
 
 		 386 aa  427  1e-118  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal  1 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  57.45 
 
 		 373 aa  426  1e-118  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  55.86 
 
 		 359 aa  422  1e-117  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  55.97 
 
 		 367 aa  421  1e-116  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  56.06 
 
 		 373 aa  419  1e-116  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  56.3 
 
 		 369 aa  419  1e-116  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  55.59 
 
 		 369 aa  416  9.999999999999999e-116  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  55.8 
 
 		 373 aa  417  9.999999999999999e-116  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  55.8 
 
 		 373 aa  417  9.999999999999999e-116  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  55.41 
 
 		 389 aa  411  1e-114  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  52.88 
 
 		 371 aa  408  1e-113  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  55.59 
 
 		 374 aa  410  1e-113  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  56.18 
 
 		 366 aa  407  1.0000000000000001e-112  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_3086  carbamoyl-phosphate synthase small subunit  56.27 
 
 		 381 aa  407  1.0000000000000001e-112  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0580438  n/a   
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  54.42 
 
 		 386 aa  402  1e-111  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2940  carbamoyl phosphate synthase small subunit  53.68 
 
 		 386 aa  404  1e-111  Shewanella putrefaciens CN-32  Bacteria  normal  0.185194  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  54.3 
 
 		 359 aa  404  1e-111  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  53.19 
 
 		 377 aa  404  1e-111  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  54.4 
 
 		 380 aa  404  1e-111  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  52.53 
 
 		 381 aa  402  1e-111  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  52.91 
 
 		 381 aa  399  9.999999999999999e-111  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  52.44 
 
 		 397 aa  399  9.999999999999999e-111  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  55.07 
 
 		 361 aa  398  9.999999999999999e-111  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  54.16 
 
 		 381 aa  399  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_011901  Tgr7_0975  carbamoyl-phosphate synthase, small subunit  55.11 
 
 		 379 aa  400  9.999999999999999e-111  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  52.91 
 
 		 385 aa  401  9.999999999999999e-111  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.0000786314 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  53.26 
 
 		 373 aa  398  9.999999999999999e-111  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  53.87 
 
 		 381 aa  399  9.999999999999999e-111  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  52.77 
 
 		 384 aa  398  9.999999999999999e-111  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.162276 
 
 
-
 
NC_008321  Shewmr4_0965  carbamoyl phosphate synthase small subunit  54.69 
 
 		 386 aa  399  9.999999999999999e-111  Shewanella sp. MR-4  Bacteria  normal  0.0738044  normal  1 
 
 
-
 
NC_009997  Sbal195_3526  carbamoyl phosphate synthase small subunit  54.84 
 
 		 386 aa  396  1e-109  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  51.94 
 
 		 394 aa  397  1e-109  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  53.62 
 
 		 381 aa  395  1e-109  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  52.79 
 
 		 385 aa  397  1e-109  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal  1 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  53.62 
 
 		 381 aa  395  1e-109  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3305  carbamoyl phosphate synthase small subunit  54.09 
 
 		 386 aa  397  1e-109  Shewanella baltica OS155  Bacteria  normal  0.314757  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  53.62 
 
 		 381 aa  395  1e-109  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  53.62 
 
 		 381 aa  395  1e-109  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  54.28 
 
 		 367 aa  396  1e-109  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  54.2 
 
 		 372 aa  397  1e-109  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_3075  carbamoyl phosphate synthase small subunit  54.23 
 
 		 381 aa  396  1e-109  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0335125  n/a   
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  50.65 
 
 		 401 aa  397  1e-109  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_0995  carbamoyl phosphate synthase small subunit  55.26 
 
 		 381 aa  395  1e-109  Shewanella denitrificans OS217  Bacteria  normal  0.055995  n/a   
 
 
-
 
NC_009665  Shew185_3401  carbamoyl phosphate synthase small subunit  54.69 
 
 		 391 aa  396  1e-109  Shewanella baltica OS185  Bacteria  hitchhiker  0.00720177  n/a   
 
 
-
 
NC_008322  Shewmr7_1003  carbamoyl phosphate synthase small subunit  54.42 
 
 		 386 aa  398  1e-109  Shewanella sp. MR-7  Bacteria  normal  0.0354323  normal  1 
 
 
-
 
NC_011663  Sbal223_1051  carbamoyl phosphate synthase small subunit  54.84 
 
 		 387 aa  397  1e-109  Shewanella baltica OS223  Bacteria  normal  0.098868  hitchhiker  0.0000017806 
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  53.62 
 
 		 381 aa  395  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  53.85 
 
 		 391 aa  397  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal  1 
 
 
-
 
NC_008577  Shewana3_0967  carbamoyl phosphate synthase small subunit  54.42 
 
 		 386 aa  398  1e-109  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00370508  normal  1 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  53.91 
 
 		 381 aa  397  1e-109  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal  1 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  53.24 
 
 		 378 aa  397  1e-109  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_002977  MCA1853  carbamoyl phosphate synthase small subunit  54.99 
 
 		 378 aa  393  1e-108  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0936768  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  49.75 
 
 		 392 aa  393  1e-108  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  49.75 
 
 		 392 aa  393  1e-108  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_008789  Hhal_1776  carbamoyl-phosphate synthase, small subunit  54.16 
 
 		 379 aa  393  1e-108  Halorhodospira halophila SL1  Bacteria  normal  0.0616181  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  54.5 
 
 		 391 aa  394  1e-108  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.618886 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  54.96 
 
 		 383 aa  392  1e-108  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  52.67 
 
 		 440 aa  393  1e-108  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_009092  Shew_2839  carbamoyl phosphate synthase small subunit  54.18 
 
 		 390 aa  394  1e-108  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00340084  normal  0.0286195 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  54.22 
 
 		 359 aa  393  1e-108  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  55.11 
 
 		 380 aa  393  1e-108  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  53.35 
 
 		 381 aa  393  1e-108  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  49.35 
 
 		 393 aa  392  1e-108  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0283036 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  53.35 
 
 		 381 aa  394  1e-108  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  52.99 
 
 		 378 aa  388  1e-107  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal  1 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  54.05 
 
 		 384 aa  389  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  51.85 
 
 		 380 aa  389  1e-107  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  52.25 
 
 		 379 aa  389  1e-107  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  52.83 
 
 		 358 aa  390  1e-107  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal  1 
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  56.68 
 
 		 379 aa  390  1e-107  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal  1 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  52.58 
 
 		 398 aa  389  1e-107  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  0.287672 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  52.39 
 
 		 384 aa  389  1e-107  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  51.22 
 
 		 357 aa  389  1e-107  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  52.53 
 
 		 389 aa  389  1e-107  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  52.38 
 
 		 387 aa  389  1e-107  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal  1 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  51.85 
 
 		 380 aa  389  1e-107  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_1671  carbamoyl-phosphate synthase, small subunit  50.12 
 
 		 504 aa  391  1e-107  Eggerthella lenta DSM 2243  Bacteria  decreased coverage  0.00077424  hitchhiker  0.00974752 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  53.37 
 
 		 379 aa  388  1e-107  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  52.28 
 
 		 376 aa  389  1e-107  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0975  carbamoyl phosphate synthase small subunit  53.91 
 
 		 381 aa  390  1e-107  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00141878  n/a   
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  52.72 
 
 		 378 aa  387  1e-106  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  51.72 
 
 		 396 aa  386  1e-106  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal  1 
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  51.87 
 
 		 392 aa  387  1e-106  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal  1 
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  51.47 
 
 		 380 aa  386  1e-106  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal  1 
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  53.48 
 
 		 378 aa  387  1e-106  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  53.78 
 
 		 391 aa  385  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_62930  carbamoyl phosphate synthase small subunit  53.48 
 
 		 378 aa  386  1e-106  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  53.24 
 
 		 379 aa  386  1e-106  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  50.92 
 
 		 388 aa  382  1e-105  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.924948 
 
 
-
 
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