More than 300 homologs were found in PanDaTox collection
for query gene Ping_2376 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  100 
 
 
265 aa  523  1e-148  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  76.89 
 
 
266 aa  418  1e-116  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  76.89 
 
 
266 aa  417  9.999999999999999e-116  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0488  putative binding protein-dependent transport system, membrane component  76.64 
 
 
272 aa  372  1e-102  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.970837  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  55.51 
 
 
255 aa  266  2.9999999999999995e-70  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_009832  Spro_3124  binding-protein-dependent transport systems inner membrane component  52.29 
 
 
255 aa  233  2.0000000000000002e-60  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  54.84 
 
 
249 aa  229  3e-59  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  52.91 
 
 
245 aa  228  8e-59  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  49.34 
 
 
253 aa  227  1e-58  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_007643  Rru_A1643  binding-protein dependent transport system inner membrane protein  52.52 
 
 
261 aa  218  7e-56  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0353041  n/a   
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  42.58 
 
 
258 aa  212  3.9999999999999995e-54  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  42.58 
 
 
258 aa  211  7.999999999999999e-54  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  44.49 
 
 
258 aa  210  2e-53  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0906  binding-protein-dependent transport systems inner membrane component  50.67 
 
 
244 aa  209  4e-53  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.53091  normal 
 
 
-
 
NC_008686  Pden_0033  binding-protein-dependent transport systems inner membrane component  45.73 
 
 
243 aa  206  5e-52  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0588  binding-protein-dependent transport systems inner membrane component  46.81 
 
 
238 aa  192  4e-48  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.98825  normal 
 
 
-
 
NC_007493  RSP_0644  ABC transporter, inner membrane subunit  48.88 
 
 
238 aa  184  9e-46  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2297  binding-protein-dependent transport systems inner membrane component  48.88 
 
 
238 aa  184  2.0000000000000003e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0792355  normal  0.132671 
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  40.97 
 
 
250 aa  172  3.9999999999999995e-42  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  34.89 
 
 
257 aa  167  1e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
257 aa  167  2e-40  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  34.89 
 
 
265 aa  166  2.9999999999999998e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  34.89 
 
 
265 aa  166  2.9999999999999998e-40  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  34.89 
 
 
257 aa  166  2.9999999999999998e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  34.89 
 
 
255 aa  166  2.9999999999999998e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  34.89 
 
 
257 aa  166  2.9999999999999998e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
249 aa  166  2.9999999999999998e-40  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  34.89 
 
 
257 aa  166  4e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
255 aa  166  4e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  34.89 
 
 
257 aa  166  4e-40  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  34.47 
 
 
265 aa  164  1.0000000000000001e-39  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
260 aa  164  1.0000000000000001e-39  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
259 aa  160  2e-38  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
256 aa  159  3e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  39.07 
 
 
274 aa  159  4e-38  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
246 aa  158  9e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.91 
 
 
249 aa  155  5.0000000000000005e-37  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
271 aa  154  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
258 aa  154  1e-36  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
257 aa  152  4e-36  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
250 aa  152  5e-36  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
283 aa  152  8e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_010001  Cphy_1151  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
254 aa  150  2e-35  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
281 aa  149  3e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
254 aa  149  5e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
265 aa  149  6e-35  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013517  Sterm_2064  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
254 aa  146  3e-34  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00112586  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
277 aa  145  6e-34  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
250 aa  145  6e-34  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2763  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
275 aa  145  8.000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
266 aa  145  9e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
222 aa  144  1e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  35.37 
 
 
250 aa  140  1.9999999999999998e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  35.37 
 
 
251 aa  140  1.9999999999999998e-32  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
251 aa  140  1.9999999999999998e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  35.04 
 
 
250 aa  140  1.9999999999999998e-32  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  34.96 
 
 
251 aa  139  3.9999999999999997e-32  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  34.55 
 
 
250 aa  139  4.999999999999999e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  34.55 
 
 
250 aa  139  6e-32  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  34.55 
 
 
250 aa  139  6e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  34.55 
 
 
250 aa  139  6e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  34.55 
 
 
250 aa  139  6e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
253 aa  138  7.999999999999999e-32  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2389  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
275 aa  138  1e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  33.62 
 
 
261 aa  137  1e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013743  Htur_0667  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
299 aa  137  1e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  33.19 
 
 
282 aa  137  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  30.84 
 
 
284 aa  136  3.0000000000000003e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
247 aa  134  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  34.09 
 
 
273 aa  132  3.9999999999999996e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  37.39 
 
 
260 aa  131  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
273 aa  129  3e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
254 aa  129  6e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
272 aa  128  9.000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
257 aa  127  2.0000000000000002e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  31.15 
 
 
259 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_013093  Amir_4889  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
258 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.90454  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
254 aa  125  7e-28  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_011831  Cagg_2734  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
267 aa  125  9e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.549296  normal 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
256 aa  124  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.92 
 
 
247 aa  124  2e-27  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
263 aa  124  2e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
258 aa  123  4e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
256 aa  121  9e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
268 aa  121  9.999999999999999e-27  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013739  Cwoe_1643  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
259 aa  120  1.9999999999999998e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.805205  normal  0.60128 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  30.27 
 
 
279 aa  119  4.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
256 aa  119  7e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
282 aa  118  7.999999999999999e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
270 aa  117  9.999999999999999e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  28.99 
 
 
288 aa  117  1.9999999999999998e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
272 aa  117  1.9999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_002620  TC0243  ABC transporter, permease protein, putative  33.01 
 
 
587 aa  117  3e-25  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
272 aa  117  3e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_008025  Dgeo_0111  ABC transporter related  34.91 
 
 
493 aa  116  3.9999999999999997e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.4 
 
 
298 aa  115  5e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  28.09 
 
 
280 aa  115  6e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
258 aa  115  6e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
268 aa  115  6e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_009972  Haur_1578  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
274 aa  114  1.0000000000000001e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000362296  n/a   
 
 
-
 
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