More than 300 homologs were found in PanDaTox collection
for query gene PMN2A_1866 on replicon NC_007335
Organism: Prochlorococcus marinus str. NATL2A



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007335  PMN2A_1866  short chain dehydrogenase  100 
 
 
240 aa  488  1e-137  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0671437  n/a   
 
 
-
 
NC_008819  NATL1_05911  short chain dehydrogenase  97.08 
 
 
240 aa  476  1e-133  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.884282  normal 
 
 
-
 
NC_009976  P9211_05381  short chain dehydrogenase  68.09 
 
 
235 aa  347  1e-94  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_0731  short chain dehydrogenase  62.55 
 
 
235 aa  316  2e-85  Synechococcus sp. CC9605  Bacteria  normal  0.510402  normal 
 
 
-
 
NC_008820  P9303_07831  short chain dehydrogenase  65.53 
 
 
241 aa  314  9e-85  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.956383 
 
 
-
 
NC_007513  Syncc9902_1632  short chain dehydrogenase  60.85 
 
 
235 aa  308  6.999999999999999e-83  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_05911  short chain dehydrogenase  57.02 
 
 
244 aa  279  4e-74  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_05991  short chain dehydrogenase  57.14 
 
 
254 aa  274  9e-73  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_05611  short chain dehydrogenase  55.88 
 
 
244 aa  274  1.0000000000000001e-72  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.713488  n/a   
 
 
-
 
NC_007577  PMT9312_0535  short chain dehydrogenase  55.88 
 
 
244 aa  269  2.9999999999999997e-71  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  46.09 
 
 
242 aa  198  5e-50  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  45.65 
 
 
242 aa  196  2.0000000000000003e-49  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_0401  short-chain dehydrogenase/reductase SDR  43.97 
 
 
240 aa  192  4e-48  Cyanothece sp. PCC 7425  Bacteria  normal  0.256418  normal  0.85584 
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  41.81 
 
 
241 aa  187  1e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1596  short chain dehydrogenase  44.63 
 
 
245 aa  182  5.0000000000000004e-45  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.184756 
 
 
-
 
NC_014248  Aazo_3368  short-chain dehydrogenase/reductase SDR  40.87 
 
 
241 aa  180  2e-44  'Nostoc azollae' 0708  Bacteria  normal  0.119808  n/a   
 
 
-
 
NC_011729  PCC7424_3351  short chain dehydrogenase  41.99 
 
 
242 aa  161  7e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_0016  short-chain dehydrogenase/reductase SDR  32.02 
 
 
231 aa  122  4e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  36.1 
 
 
269 aa  118  7e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_003909  BCE_2044  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
242 aa  118  7.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.252391  n/a   
 
 
-
 
NC_005945  BAS1819  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
242 aa  118  7.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1793  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
242 aa  118  7.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.512815  n/a   
 
 
-
 
NC_006274  BCZK1775  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
242 aa  118  7.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3364  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
239 aa  118  7.999999999999999e-26  Bacillus cereus G9842  Bacteria  normal  0.115947  hitchhiker  0.00000000000000894376 
 
 
-
 
NC_007530  GBAA_1958  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
242 aa  118  7.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2065  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
239 aa  118  7.999999999999999e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000861938  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1826  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
239 aa  118  7.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1995  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
239 aa  118  7.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.591310000000001e-44 
 
 
-
 
NC_011725  BCB4264_A1964  3-ketoacyl-(acyl-carrier-protein) reductase  38.59 
 
 
239 aa  118  7.999999999999999e-26  Bacillus cereus B4264  Bacteria  normal  0.130885  n/a   
 
 
-
 
NC_009674  Bcer98_1494  3-ketoacyl-(acyl-carrier-protein) reductase  37.7 
 
 
239 aa  117  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000128809  n/a   
 
 
-
 
NC_013132  Cpin_1337  3-ketoacyl-(acyl-carrier-protein) reductase  35.52 
 
 
238 aa  115  5e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.541378  normal 
 
 
-
 
NC_009972  Haur_0132  short-chain dehydrogenase/reductase SDR  32.89 
 
 
233 aa  115  6e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  32.9 
 
 
241 aa  114  1.0000000000000001e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0302  short-chain dehydrogenase/reductase SDR  31.62 
 
 
232 aa  113  3e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0295505  normal  0.114297 
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  31.22 
 
 
261 aa  113  3e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
NC_009523  RoseRS_0706  short-chain dehydrogenase/reductase SDR  30.25 
 
 
237 aa  112  4.0000000000000004e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0964  short-chain dehydrogenase/reductase SDR  28.76 
 
 
227 aa  108  7.000000000000001e-23  Thermobispora bispora DSM 43833  Bacteria  normal  0.0180181  normal  0.277757 
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  27.54 
 
 
248 aa  108  8.000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_011661  Dtur_0425  short-chain dehydrogenase/reductase SDR  31.86 
 
 
241 aa  105  4e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.116852  n/a   
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  28.88 
 
 
261 aa  105  5e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_0488  short-chain dehydrogenase/reductase SDR  28.33 
 
 
244 aa  105  5e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0501  short-chain dehydrogenase/reductase SDR  28.33 
 
 
244 aa  105  5e-22  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00365065 
 
 
-
 
NC_013061  Phep_4049  3-ketoacyl-(acyl-carrier-protein) reductase  34.43 
 
 
238 aa  104  9e-22  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0480  short-chain dehydrogenase/reductase SDR  32.22 
 
 
243 aa  104  1e-21  Shewanella baltica OS195  Bacteria  normal  0.853199  normal 
 
 
-
 
NC_008148  Rxyl_2798  short-chain dehydrogenase/reductase SDR  31.05 
 
 
235 aa  103  3e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2193  short chain dehydrogenase/reductase family oxidoreductase  30.9 
 
 
235 aa  103  3e-21  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  decreased coverage  0.00806787 
 
 
-
 
NC_013730  Slin_0085  short-chain dehydrogenase/reductase SDR  28.99 
 
 
250 aa  103  3e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3907  short-chain dehydrogenase/reductase SDR  28.87 
 
 
246 aa  101  8e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.267776 
 
 
-
 
NC_004347  SO_4141  short chain dehydrogenase/reductase family oxidoreductase  30.96 
 
 
243 aa  101  1e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  31.06 
 
 
244 aa  100  1e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2999  short-chain dehydrogenase/reductase SDR  35.48 
 
 
250 aa  101  1e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.109628  normal  0.14985 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  32.84 
 
 
259 aa  100  2e-20  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007512  Plut_2026  short chain dehydrogenase/reductase family oxidoreductase  29.76 
 
 
227 aa  100  2e-20  Chlorobium luteolum DSM 273  Bacteria  normal  normal  0.293852 
 
 
-
 
NC_010511  M446_4798  3-hydroxybutyrate dehydrogenase  32.76 
 
 
261 aa  100  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.000904747 
 
 
-
 
NC_009439  Pmen_2896  short-chain dehydrogenase/reductase SDR  28.63 
 
 
240 aa  100  2e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.148916  normal 
 
 
-
 
NC_014212  Mesil_1171  short-chain dehydrogenase/reductase SDR  29.61 
 
 
238 aa  99.8  3e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.399765 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  30.23 
 
 
236 aa  100  3e-20  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_007406  Nwi_2755  3-hydroxybutyrate dehydrogenase  32.02 
 
 
262 aa  99.8  3e-20  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.137616  normal  0.463862 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  32.09 
 
 
264 aa  99.8  4e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2960  short-chain dehydrogenase/reductase SDR  39.06 
 
 
251 aa  99.4  5e-20  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3687  short-chain dehydrogenase/reductase SDR  30.8 
 
 
243 aa  99.4  5e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0112  NAD-dependent epimerase/dehydratase  28.33 
 
 
244 aa  99  6e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  31.86 
 
 
264 aa  99  7e-20  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  31.96 
 
 
259 aa  98.6  7e-20  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  31.6 
 
 
258 aa  99  7e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2262  short-chain dehydrogenase/reductase SDR  30 
 
 
244 aa  98.6  9e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.0000989308  normal 
 
 
-
 
NC_008709  Ping_0045  short-chain dehydrogenase/reductase SDR  27.53 
 
 
256 aa  97.8  1e-19  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00292404 
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  29.17 
 
 
244 aa  98.2  1e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  32.86 
 
 
256 aa  98.2  1e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013501  Rmar_0154  short-chain dehydrogenase/reductase SDR  30.42 
 
 
261 aa  97.8  1e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  28.94 
 
 
244 aa  97.8  1e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0205  short-chain dehydrogenase/reductase SDR  33.33 
 
 
257 aa  98.2  1e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.76225  normal  0.242071 
 
 
-
 
NC_014230  CA2559_04715  Short-chain dehydrogenase/reductase SDR  28.8 
 
 
249 aa  97.8  1e-19  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.863639  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  32.39 
 
 
262 aa  98.2  1e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
BN001308  ANIA_00179  oxidoreductase, short chain dehydrogenase/reductase family (AFU_orthologue; AFUA_5G11240)  28.92 
 
 
313 aa  97.1  2e-19  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.983253  normal 
 
 
-
 
NC_009511  Swit_0380  short-chain dehydrogenase/reductase SDR  32.12 
 
 
266 aa  97.1  2e-19  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.461648 
 
 
-
 
NC_010803  Clim_2374  short-chain dehydrogenase/reductase SDR  28.82 
 
 
256 aa  97.4  2e-19  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  32.29 
 
 
267 aa  97.4  2e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_009784  VIBHAR_05303  oxidoreductase  28.27 
 
 
239 aa  97.1  2e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009943  Dole_2554  short-chain dehydrogenase/reductase SDR  33.16 
 
 
285 aa  97.4  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4057  short-chain dehydrogenase/reductase SDR  30.38 
 
 
239 aa  97.4  2e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  30.28 
 
 
266 aa  96.7  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  31.94 
 
 
259 aa  96.3  3e-19  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_008726  Mvan_4623  short-chain dehydrogenase/reductase SDR  33.7 
 
 
265 aa  96.3  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4514  short-chain dehydrogenase/reductase SDR  26.64 
 
 
257 aa  96.7  3e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0850  short chain dehydrogenase/reductase family oxidoreductase  28.45 
 
 
249 aa  95.9  4e-19  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2639  short-chain dehydrogenase/reductase SDR  28.76 
 
 
238 aa  96.3  4e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.37123  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  33.51 
 
 
262 aa  96.3  4e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2888  Short-chain dehydrogenase/reductase SDR  29.66 
 
 
257 aa  95.9  5e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0119499 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  36.75 
 
 
266 aa  95.9  5e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_013757  Gobs_3795  short-chain dehydrogenase/reductase SDR  29.36 
 
 
252 aa  95.9  5e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.586754  n/a   
 
 
-
 
NC_002977  MCA2001  3-oxoacyl-(acyl-carrier-protein) reductase  29.95 
 
 
245 aa  95.5  6e-19  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2647  short-chain dehydrogenase/reductase SDR  29.96 
 
 
253 aa  95.9  6e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3769  short-chain dehydrogenase/reductase SDR  27.76 
 
 
247 aa  95.9  6e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3033  short-chain dehydrogenase/reductase SDR  31.76 
 
 
251 aa  95.5  6e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.612185 
 
 
-
 
NC_011884  Cyan7425_1650  short-chain dehydrogenase/reductase SDR  30.13 
 
 
254 aa  95.5  7e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.206138  normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  30.1 
 
 
258 aa  95.1  8e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  35.64 
 
 
259 aa  95.1  8e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009441  Fjoh_5037  3-ketoacyl-(acyl-carrier-protein) reductase  32.24 
 
 
238 aa  95.1  8e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293143  n/a   
 
 
-
 
NC_008699  Noca_0409  short-chain dehydrogenase/reductase SDR  30.64 
 
 
248 aa  95.1  8e-19  Nocardioides sp. JS614  Bacteria  normal  0.832513  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>