Gene M446_4798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4798 
Symbol 
ID6129411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5274090 
End bp5274875 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID641644935 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001771562 
Protein GI170742907 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000904747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTCA CCGCGAAGAC CGCTGTCGTG ACCGGATCGA CGAGCGGAAT CGGCCTCGCC 
ATCGCGCGCG CCTTCGCCAA GGAAGGCGCC AACGTGGTGC TCAACGGCTT CGGGAAGCCG
GAGGAGATCG AGCGCGAGCG CGCCGGCATC GAGTCCGAGT TCGGCGTGAA GGCGCTCTAC
TCGGGCGCCG ACATGTCGAA GCCGGAGGAG ATCGCCGGGA TGATCGCCGA GGCGGAATCC
GCCTTCGGGG CCGTCGACGT GCTGGTGAAC AACGCCGGCA TCCAGTTCGT CTCGCCGATC
GAGGAGTTCC CGCTCGCCAA GTGGGATCAG ATCATCGCGA TCAACCTCTC CTCCGCGTTC
CACGCGATGC GGGCCGCGAT CCCCGGCATG AAGCGCAAGG GCTGGGGCCG GATCATCAAC
ACGGCCTCGG CCCACTCGCT GGTGGCCTCG CCCTACAAGT CCGCCTACGT CTCGGCCAAG
CACGGCATCG CCGGGCTCAC CAAGACCGCG GCGCTCGAAC TCGCGCCGCA CAAGGTCACG
GTGAACTGCA TCTCGCCGGG CTACGTCTGG ACGCCGCTCG TGGAGAGCCA GATCCCCGAC
ACCATGAAGG CGCGGGGCCT GACCCGGGAG CAGGTGATCG ACGACGTGCT GCTGGCGGCC
CAGCCCACCA AGGAATTCGT GACCGTCGAC CAGGTGGCGG CGCTCGCGGT CTTCCTGTGC
TCGGATGCGG CGAGCCAGAT CACCGGCGCC AACATCTCGG TCGACGGCGG CTGGACCGCC
GCCTGA
 
Protein sequence
MTLTAKTAVV TGSTSGIGLA IARAFAKEGA NVVLNGFGKP EEIERERAGI ESEFGVKALY 
SGADMSKPEE IAGMIAEAES AFGAVDVLVN NAGIQFVSPI EEFPLAKWDQ IIAINLSSAF
HAMRAAIPGM KRKGWGRIIN TASAHSLVAS PYKSAYVSAK HGIAGLTKTA ALELAPHKVT
VNCISPGYVW TPLVESQIPD TMKARGLTRE QVIDDVLLAA QPTKEFVTVD QVAALAVFLC
SDAASQITGA NISVDGGWTA A