Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0535 |
Symbol | |
ID | 3765334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 501103 |
End bp | 501837 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637797055 |
Product | short chain dehydrogenase |
Protein accession | YP_397032 |
Protein GI | 78778920 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATCCC CCCCCAATCT GAATAAATTG AAACTAGCTT TTATAACAGG TGCTACGAAA GGTATTGGTA GATCTACCGC AATTACTTTT GCTAAAGCTG GTTGGGATTT AATTCTACTT TCCAGGAATA TGGATTTATT GGAGAAACTA AAGAGTGAAT TATTGACTAC TAAATCAAAA ATTAGCCTGG TTAAATGTGA TTTAGCTAAT CCTATAGGAA TAGAGAATTG TGTTGGAGAA GCAATTGAGA AATATGGTTG CCCTTCAGTC TTGATAAATA ATGCCGGTTG CGCATTTAAT GGGTCTTTAG TTGAAATGGA TTTTGGGCAA TGGGAACAAA CAATTCAAAT AAACCTTACG AGTGTTTTTC AAATTTGCAG CTCAATAATC CCTCAAATGA GAAAAAATGG TGGTTTAGTA ATTAATGTTA GTAGTCATGC CTCTTATAAT GCTTTCCCTC AATGGGGTGC ATATTGTATT TCAAAATCTG CACTCACCAT GTTTACTAAA TGCTTGAGGG AAGAGGAGAG ATCCAATTCA ATAAGAGCAT GCACAATAAC TTTAGGTTCA GTAAATACTC CTCTTTGGGA CTCCGAATCA ATTAATTCTG ATTTTGATAG AACTTCTATG CTCTCCTCAA ATAAGGTATC AGATACTATT CTTTATATGG CACAACAACC CGAGTCACAA TTGATTGAAG ACTTAACTTT GATGCCTTCT GGAGGTGCTT TTTGA
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Protein sequence | MKSPPNLNKL KLAFITGATK GIGRSTAITF AKAGWDLILL SRNMDLLEKL KSELLTTKSK ISLVKCDLAN PIGIENCVGE AIEKYGCPSV LINNAGCAFN GSLVEMDFGQ WEQTIQINLT SVFQICSSII PQMRKNGGLV INVSSHASYN AFPQWGAYCI SKSALTMFTK CLREEERSNS IRACTITLGS VNTPLWDSES INSDFDRTSM LSSNKVSDTI LYMAQQPESQ LIEDLTLMPS GGAF
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