Gene PMT9312_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0535 
Symbol 
ID3765334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp501103 
End bp501837 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID637797055 
Productshort chain dehydrogenase 
Protein accessionYP_397032 
Protein GI78778920 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATCCC CCCCCAATCT GAATAAATTG AAACTAGCTT TTATAACAGG TGCTACGAAA 
GGTATTGGTA GATCTACCGC AATTACTTTT GCTAAAGCTG GTTGGGATTT AATTCTACTT
TCCAGGAATA TGGATTTATT GGAGAAACTA AAGAGTGAAT TATTGACTAC TAAATCAAAA
ATTAGCCTGG TTAAATGTGA TTTAGCTAAT CCTATAGGAA TAGAGAATTG TGTTGGAGAA
GCAATTGAGA AATATGGTTG CCCTTCAGTC TTGATAAATA ATGCCGGTTG CGCATTTAAT
GGGTCTTTAG TTGAAATGGA TTTTGGGCAA TGGGAACAAA CAATTCAAAT AAACCTTACG
AGTGTTTTTC AAATTTGCAG CTCAATAATC CCTCAAATGA GAAAAAATGG TGGTTTAGTA
ATTAATGTTA GTAGTCATGC CTCTTATAAT GCTTTCCCTC AATGGGGTGC ATATTGTATT
TCAAAATCTG CACTCACCAT GTTTACTAAA TGCTTGAGGG AAGAGGAGAG ATCCAATTCA
ATAAGAGCAT GCACAATAAC TTTAGGTTCA GTAAATACTC CTCTTTGGGA CTCCGAATCA
ATTAATTCTG ATTTTGATAG AACTTCTATG CTCTCCTCAA ATAAGGTATC AGATACTATT
CTTTATATGG CACAACAACC CGAGTCACAA TTGATTGAAG ACTTAACTTT GATGCCTTCT
GGAGGTGCTT TTTGA
 
Protein sequence
MKSPPNLNKL KLAFITGATK GIGRSTAITF AKAGWDLILL SRNMDLLEKL KSELLTTKSK 
ISLVKCDLAN PIGIENCVGE AIEKYGCPSV LINNAGCAFN GSLVEMDFGQ WEQTIQINLT
SVFQICSSII PQMRKNGGLV INVSSHASYN AFPQWGAYCI SKSALTMFTK CLREEERSNS
IRACTITLGS VNTPLWDSES INSDFDRTSM LSSNKVSDTI LYMAQQPESQ LIEDLTLMPS
GGAF