| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0302 |
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| Symbol | |
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| ID | 5537764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 377364 |
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| End bp | 378062 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640892466 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001430453 |
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| Protein GI | 156740324 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0295505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.114297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA TTCTCATCAC CGGCGCCAGC CGGGGCATCG GGCGGGCGAC AGCGCTCGCG
CTCGCGGCGC CTGGCGTCGC CATGACCCTG GCGGCGCGAT CCGTTTCTCT CCTGGACGAA
GTGGCGGCGG ACGTCCGCGC GGCCGGCGCG TCGGCGGTCA TCGCGCCATG CGACGTGACG
GACGAAGATG AGATTCGTCA CCTGATCGAA CAGACGACCA TAGCAACCGG ACGGATCGAT
CTGCTCGTTC ACAGCGTCGG CGGGGCATAT GTCGCACCGG TGACGCAGAT CACTCAGACG
CATTGGGATG AGCAGGTGCG TGTGCACCTG ACGAGTCTCT TCCTGATCTG CAAGCATGCA
ACGCCGTTCA TGCACAACGG CGGATTGCTG GTGTACGTCG CCTCGGTAGC GGCGCGTCAG
GTCTTCCCCA ACTGGTCGGC GTATTGCGCC GCCAAACATG GCGCGCTGGG GTTGCTCGGC
GCCGTGCGTG AAGAAGTGCG ACCGTATGGC GTGCGCGTGA CGGCGGTGCT CCCGGCGGCA
ACCGATACCG GCTTGTGGGA CGATCTTCCC GGCGATTGGA ACCGTGCGGC GATGATGCAA
CCGGCAGACG TCGCTGCCGC TATCGCCAGT CTGGCAGCGT ATCCGCCGCA CGTCGCCGTC
GAGGAGTTGA CCGTCGGGCA TGTCGCCGGC AGGCTTTAG
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| Protein sequence | MKTILITGAS RGIGRATALA LAAPGVAMTL AARSVSLLDE VAADVRAAGA SAVIAPCDVT
DEDEIRHLIE QTTIATGRID LLVHSVGGAY VAPVTQITQT HWDEQVRVHL TSLFLICKHA
TPFMHNGGLL VYVASVAARQ VFPNWSAYCA AKHGALGLLG AVREEVRPYG VRVTAVLPAA
TDTGLWDDLP GDWNRAAMMQ PADVAAAIAS LAAYPPHVAV EELTVGHVAG RL
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