Gene Slin_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0085 
Symbol 
ID8723813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp101321 
End bp102073 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content56% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003384957 
Protein GI284035027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA TTGCCCTCAT TACCGGCGCA ACCTCTGGCA TTGGCCGCGC TACGGCTAAA 
GCATTTGCCG ATCTGGAATA CCGTCTCATT CTTTGCGGTC GTCGGCAGGA ACGTCTGGCC
GAACTGGAAG AACAGCTTGG TGCACAGACT GCCGTGACTA CCCTCAGTTT CGATGTGCGC
GACTGGGCCG AAGTCAGTGA CGCCATCAGC AGCCTGCCCG ATGAGTGGAA GGCTATCGAC
ATTCTGGTGA ACAATGCCGG AAACGCCTTT GGGATGTCGC CCATTCAGGA TGGCGACATT
GCCGACTGGG ATTTGATGAT CGACGGAAAT GTGCAGGGGT TATTGTATGT GTCGAAGGCC
GTAACGCCGG GGATGGTAGA ACGCCAGCGG GGCCACATTG TTAACCTGAG TTCGATAGCG
GGCAAGCAAA CCTACGCCAA TGGGGCTGTG TACTGCGCCA GTAAAGCCGC CGTTGAAGCC
ATCAGCACGG GTATGCGGCT GGACCTCACC CAGCACGGAA TCAAAGTAAC GAATATTGCC
CCCGGTGCCG TTGAAACGGA GTTTTCAGTA GTACGCTTTA AAGGCGATAC CGAACGGGCG
GCTAAAGTAT ACGAAGGGTT TTCGCCCCTC ACCGCCGATG ATATTGCCGA TACCATCGTT
TATGCCGTAA CGGCCCCCGC CAACGTCACC ATTGCCGATA TGACTATCCT GGCTTCGGCT
CAGGCCGCTG CTACGACGAT TCATCGGAAG TAA
 
Protein sequence
MSRIALITGA TSGIGRATAK AFADLEYRLI LCGRRQERLA ELEEQLGAQT AVTTLSFDVR 
DWAEVSDAIS SLPDEWKAID ILVNNAGNAF GMSPIQDGDI ADWDLMIDGN VQGLLYVSKA
VTPGMVERQR GHIVNLSSIA GKQTYANGAV YCASKAAVEA ISTGMRLDLT QHGIKVTNIA
PGAVETEFSV VRFKGDTERA AKVYEGFSPL TADDIADTIV YAVTAPANVT IADMTILASA
QAAATTIHRK