Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0085 |
Symbol | |
ID | 8723813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 101321 |
End bp | 102073 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003384957 |
Protein GI | 284035027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TTGCCCTCAT TACCGGCGCA ACCTCTGGCA TTGGCCGCGC TACGGCTAAA GCATTTGCCG ATCTGGAATA CCGTCTCATT CTTTGCGGTC GTCGGCAGGA ACGTCTGGCC GAACTGGAAG AACAGCTTGG TGCACAGACT GCCGTGACTA CCCTCAGTTT CGATGTGCGC GACTGGGCCG AAGTCAGTGA CGCCATCAGC AGCCTGCCCG ATGAGTGGAA GGCTATCGAC ATTCTGGTGA ACAATGCCGG AAACGCCTTT GGGATGTCGC CCATTCAGGA TGGCGACATT GCCGACTGGG ATTTGATGAT CGACGGAAAT GTGCAGGGGT TATTGTATGT GTCGAAGGCC GTAACGCCGG GGATGGTAGA ACGCCAGCGG GGCCACATTG TTAACCTGAG TTCGATAGCG GGCAAGCAAA CCTACGCCAA TGGGGCTGTG TACTGCGCCA GTAAAGCCGC CGTTGAAGCC ATCAGCACGG GTATGCGGCT GGACCTCACC CAGCACGGAA TCAAAGTAAC GAATATTGCC CCCGGTGCCG TTGAAACGGA GTTTTCAGTA GTACGCTTTA AAGGCGATAC CGAACGGGCG GCTAAAGTAT ACGAAGGGTT TTCGCCCCTC ACCGCCGATG ATATTGCCGA TACCATCGTT TATGCCGTAA CGGCCCCCGC CAACGTCACC ATTGCCGATA TGACTATCCT GGCTTCGGCT CAGGCCGCTG CTACGACGAT TCATCGGAAG TAA
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Protein sequence | MSRIALITGA TSGIGRATAK AFADLEYRLI LCGRRQERLA ELEEQLGAQT AVTTLSFDVR DWAEVSDAIS SLPDEWKAID ILVNNAGNAF GMSPIQDGDI ADWDLMIDGN VQGLLYVSKA VTPGMVERQR GHIVNLSSIA GKQTYANGAV YCASKAAVEA ISTGMRLDLT QHGIKVTNIA PGAVETEFSV VRFKGDTERA AKVYEGFSPL TADDIADTIV YAVTAPANVT IADMTILASA QAAATTIHRK
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