Gene A9601_05911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_05911 
Symbol 
ID4717291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp516558 
End bp517292 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content37% 
IMG OID640078303 
Productshort chain dehydrogenase 
Protein accessionYP_001008984 
Protein GI123968126 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATCCC CCAAAAAACC GAATAACTTG AAACTAGCTT TTATAACGGG TGCTACGAAA 
GGTATTGGTA GATCTACCGC AATTACTTTT GCCAATGCTG GCTGGGATTT AATTTTACTC
TCCAGGAATA TGGATTTAAT GGAGAAACTA AAGAGCGAAC TGTTGACCAC TAAATCAAAA
ATTAACTTAG TAAAATGTGA TTTATCTAAT CCTCTAGAAA TAAAGCATTG TGTTAAAGAG
GCAATTGACA AGTATGGGTG CCCTTCAGTA TTGATAAATA ATGCAGGTTG CGCATTTAAT
GGCCCTTTAG TTGAAATGGA ATTAGGTCAA TGGGAACAAA CTATTCAAAT AAACCTCACA
AGTGTTTTTC AAATTTGTAG TTCAATCATT CCTCACATGA GAAAAAATGG TGGTTTAGTT
ATTAATGTTA GTAGTCATGC TTCTTATAAT GCATTCCCCC AATGGGGAGC TTATTGTGTT
TCAAAATCTG CACTAGCTAT GTTTACTAAA TGCTTGAGGG AGGAGGAGAG GTCTAATTCA
ATAAGAGCGT GCACAATAAC TCTGGGTTCA GTAAATACTC CTCTTTGGGA CTCCGAATCA
ATCAATTCTG ATTTTGATAG AACTTCTATG CTCTCCTCAA AAGAGGTATC AGAAACTATT
CTCTACATGG CTCAAAAACC TGAATCACAA TTGATCGAAG ACTTGACTTT GATGCCTTCT
GGCGGAGCCT TTTAA
 
Protein sequence
MKSPKKPNNL KLAFITGATK GIGRSTAITF ANAGWDLILL SRNMDLMEKL KSELLTTKSK 
INLVKCDLSN PLEIKHCVKE AIDKYGCPSV LINNAGCAFN GPLVEMELGQ WEQTIQINLT
SVFQICSSII PHMRKNGGLV INVSSHASYN AFPQWGAYCV SKSALAMFTK CLREEERSNS
IRACTITLGS VNTPLWDSES INSDFDRTSM LSSKEVSETI LYMAQKPESQ LIEDLTLMPS
GGAF