Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2999 |
Symbol | |
ID | 5084599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3063785 |
End bp | 3064537 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640484571 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001169190 |
Protein GI | 146279031 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.109628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.14985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTC TGCAGGGCAA GGTTGTGGCG ATCACGGGCG CCAGTCGCGG GATCGGCGCG GCCGCGGTGC GCGTCTTTTC CGAGGCGGGG GCGCGGGTCG CGCTGCTGGC CCGAAGCGCG GACGAGATCG AGGCGCTTGC GGCCGAAGCC GGTCACGGCG CCTTCGCCAT CCGCTGCGAC GTGGCCGACT GGGAGGGCAC GCGCGCGGCG ATCGATCAGG TGGTCTCGAC CGCCGGCCGC ATCGACGTGC TGATCAACAA CGCGGGCGTG ATCGAGCCGA TCGCGCGCAT GGCCGACGCC GACCCCGCGG CATGGGCGAG CGCCATCGAC ATCAACCTCA AGGGCGTGTT CCACGGGATG CGCGCCGCCG TGCCGCACAT GCGCGGCAAG GGCGGCACGA TCATCACCGT CTCCTCGGGC GCCGCGCAGA ACGCGCTCGA AGGCTGGAGC GCCTATTGCA GCTCGAAGGC GGGGGCGGCG ATGCTGACGC GCTGCGCCCA TCTGGAAGAG GCGGTCAACC GCATCCGCAT CATGGGCCTC TCGCCCGGGA CGGTCGCGAC CGAGATGCAG GACAAGATCC GCGAGAGCGG CGTCAATCCG GTGAGCCGTC TCGATCCCTC GGCCCACATC CCCGCCGACT GGCCGGCAAG GGCGCTGCTG TGGATGTGCG GGCCCGGCGC CGACCGCTGG CTCGGGCAGG AGATTTCGCT GCGCGACGAG AGCATCCGGC GGGCCGTGGG TCTCGGCGCA TGA
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Protein sequence | MATLQGKVVA ITGASRGIGA AAVRVFSEAG ARVALLARSA DEIEALAAEA GHGAFAIRCD VADWEGTRAA IDQVVSTAGR IDVLINNAGV IEPIARMADA DPAAWASAID INLKGVFHGM RAAVPHMRGK GGTIITVSSG AAQNALEGWS AYCSSKAGAA MLTRCAHLEE AVNRIRIMGL SPGTVATEMQ DKIRESGVNP VSRLDPSAHI PADWPARALL WMCGPGADRW LGQEISLRDE SIRRAVGLGA
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