| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2896 |
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| Symbol | |
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| ID | 5107811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3205584 |
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| End bp | 3206306 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504147 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001188383 |
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| Protein GI | 146307918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.148916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG TCATTCTCAT CACCGGCGCC AGCAGCGGCA TCGGCGAAGC CATCGCCAGA
CATCTCGCAA GCCTGGGTCA CCAGGTGGTA CTGGGCGCGC GGCGCATCGA TCGCCTGCAG
GCCCTGGTAG AAGAACTGCA GGCCCAGGGT CAACAGGCCT CGTGCCGCAC CCTCGATGTC
AGCCAACTGC ACGACATGCA GGCTTTCGTC GAGCATGCCG AAACTCATCA TGGCCCTGTC
GATGTGATCA TCAACAACGC CGGCGTGATG CCGCTGTCGC CGCTCAACGC CCTGAAGGTG
GATGAGTGGA ACCGCATGAT CGACGTCAAC GTGCGCGGTG TGCTGCACGG TATCGCTGCC
GTGCTGCCAG GCATGGAGAA ACGCGGGCGC GGCCAGATCA TCAATATCGC CTCCATCGGT
GCCCACGCCG TATCGCCGAC CGCCGCGGTC TATTGCGCGA CCAAGTACGC CGTCTGGGCG
ATTTCCGAAG GCCTGCGCCA GGAAAGCGAG CGCGTGCGCG TCACCACCAT CTGCCCGGGC
GTGGTCGAGT CCGAGCTGGC CGACAGCATC ACCGATGCCA GCGCCCGCGA TGCGATGAAG
GCCTTCCGCC GTATCGCCAT CACGCCGGAT GCCATCGCCC GCGCGGTGGC CTATGCAGTC
GAACAGCCGG ACGACGTCGA TGTCAGCGAA GTCATCGTGC GCCCGACCGC CAGCCCTTAT
TGA
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| Protein sequence | MSKVILITGA SSGIGEAIAR HLASLGHQVV LGARRIDRLQ ALVEELQAQG QQASCRTLDV
SQLHDMQAFV EHAETHHGPV DVIINNAGVM PLSPLNALKV DEWNRMIDVN VRGVLHGIAA
VLPGMEKRGR GQIINIASIG AHAVSPTAAV YCATKYAVWA ISEGLRQESE RVRVTTICPG
VVESELADSI TDASARDAMK AFRRIAITPD AIARAVAYAV EQPDDVDVSE VIVRPTASPY
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