178 homologs were found in PanDaTox collection
for query gene Xfasm12_0405 on replicon NC_010513
Organism: Xylella fastidiosa M12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  100 
 
 
91 aa  187  4e-47  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  100 
 
 
91 aa  187  4e-47  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  97.8 
 
 
91 aa  184  4e-46  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  73.33 
 
 
93 aa  140  4e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  67.42 
 
 
91 aa  130  6e-30  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  66.29 
 
 
94 aa  129  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_007484  Noc_0571  XRE family transcriptional regulator  56.52 
 
 
107 aa  95.9  2e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  51.11 
 
 
95 aa  90.9  5e-18  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_007510  Bcep18194_A6433  XRE family plasmid maintenance system antidote protein  52.63 
 
 
100 aa  89.4  2e-17  Burkholderia sp. 383  Bacteria  normal  normal  0.294261 
 
 
-
 
NC_010508  Bcenmc03_3101  XRE family plasmid maintenance system antidote protein  53.12 
 
 
100 aa  89  2e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.768418 
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  53.12 
 
 
100 aa  88.6  2e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  53.12 
 
 
100 aa  88.6  2e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3858  XRE family plasmid maintenance system antidote protein  55.21 
 
 
105 aa  87.4  6e-17  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3643  XRE family plasmid maintenance system antidote protein  53.33 
 
 
95 aa  87  7e-17  Pseudomonas putida GB-1  Bacteria  normal  0.0160538  normal 
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  52.38 
 
 
96 aa  87  7e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  52.75 
 
 
94 aa  85.1  3e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  53.85 
 
 
101 aa  84.7  4e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  52.33 
 
 
96 aa  82.8  0.000000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  51.25 
 
 
95 aa  82  0.000000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  53.66 
 
 
95 aa  82.8  0.000000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_007963  Csal_1677  XRE family plasmid maintenance system antidote protein  48.31 
 
 
93 aa  80.9  0.000000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1105  plasmid maintenance system antidote protein, XRE family  56.63 
 
 
90 aa  80.5  0.000000000000007  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0903859  normal 
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  51.22 
 
 
98 aa  79.7  0.00000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  52.56 
 
 
105 aa  79.3  0.00000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  49.37 
 
 
99 aa  78.6  0.00000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  49.43 
 
 
104 aa  77.8  0.00000000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  41.94 
 
 
103 aa  77  0.00000000000007  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  45.98 
 
 
97 aa  76.6  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  51.25 
 
 
96 aa  74.7  0.0000000000004  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_42030  antitoxin protein  44.94 
 
 
95 aa  74.7  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  48.15 
 
 
96 aa  74.3  0.0000000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  41.94 
 
 
99 aa  70.1  0.00000000001  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  44.87 
 
 
108 aa  70.1  0.00000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  47.56 
 
 
109 aa  68.6  0.00000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  41.25 
 
 
97 aa  67.8  0.00000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  42.31 
 
 
101 aa  67.4  0.00000000006  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  45.95 
 
 
102 aa  67.8  0.00000000006  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  43.9 
 
 
108 aa  65.5  0.0000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  47.44 
 
 
100 aa  66.2  0.0000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_007604  Synpcc7942_2319  XRE family plasmid maintenance system antidote protein  54.24 
 
 
72 aa  65.1  0.0000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2779  plasmid maintenance system antidote protein  45.78 
 
 
110 aa  65.1  0.0000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.48213  n/a   
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  45.68 
 
 
98 aa  65.5  0.0000000003  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  41.46 
 
 
107 aa  64.7  0.0000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2852  XRE family plasmid maintenance system antidote protein  43.59 
 
 
100 aa  64.7  0.0000000005  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  49.33 
 
 
98 aa  63.9  0.0000000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  42.86 
 
 
99 aa  62.8  0.000000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  42.86 
 
 
99 aa  62.4  0.000000002  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  40.7 
 
 
109 aa  62.4  0.000000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_011004  Rpal_3616  XRE family plasmid maintenance system antidote protein  40.24 
 
 
100 aa  61.6  0.000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.322775  n/a   
 
 
-
 
NC_009485  BBta_0902  hypothetical protein  43.37 
 
 
199 aa  61.2  0.000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  38.71 
 
 
104 aa  61.2  0.000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1216  XRE family plasmid maintenance system antidote protein  43.75 
 
 
101 aa  60.5  0.000000007  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1906  XRE family plasmid maintenance system antidote protein  37.21 
 
 
100 aa  60.5  0.000000008  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000136892  n/a   
 
 
-
 
NC_009727  CBUD_0533  virulence-associated protein I  40 
 
 
103 aa  60.5  0.000000008  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.888429  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1669  addiction module antidote protein  40 
 
 
101 aa  60.5  0.000000009  Coxiella burnetii RSA 331  Bacteria  normal  0.179147  n/a   
 
 
-
 
NC_013530  Xcel_0947  XRE family plasmid maintenance system antidote protein  37.35 
 
 
106 aa  59.7  0.00000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5444  XRE family plasmid maintenance system antidote protein  47.95 
 
 
109 aa  58.9  0.00000002  Methylobacterium sp. 4-46  Bacteria  normal  0.401369  normal  0.26731 
 
 
-
 
NC_013174  Jden_0768  XRE family plasmid maintenance system antidote protein  42.47 
 
 
100 aa  59.3  0.00000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3001  XRE family plasmid maintenance system antidote protein  43.75 
 
 
100 aa  59.3  0.00000002  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.770477 
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  39.08 
 
 
105 aa  59.3  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  39.08 
 
 
105 aa  59.3  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1963  XRE family plasmid maintenance system antidote protein  45.45 
 
 
99 aa  58.9  0.00000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0393563 
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  40 
 
 
102 aa  58.9  0.00000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_007484  Noc_0415  putative plasmid maintenance system antidote protein VapI  47.22 
 
 
78 aa  58.5  0.00000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2786  XRE family plasmid maintenance system antidote protein  41.33 
 
 
106 aa  57.8  0.00000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  unclonable  0.000000094081  n/a   
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  39.74 
 
 
107 aa  57.8  0.00000005  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_009656  PSPA7_5378  addiction module antidote protein  44 
 
 
101 aa  57  0.00000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.369538  n/a   
 
 
-
 
NC_009800  EcHS_A2644  putative addiction module  46.48 
 
 
1365 aa  57  0.00000008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0642  hypothetical protein  38.55 
 
 
96 aa  57  0.00000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.000000446232  normal  0.460246 
 
 
-
 
NC_010338  Caul_3225  XRE family plasmid maintenance system antidote protein  35.06 
 
 
106 aa  56.2  0.0000001  Caulobacter sp. K31  Bacteria  normal  normal  0.114466 
 
 
-
 
NC_013037  Dfer_4918  XRE family plasmid maintenance system antidote protein  38.36 
 
 
99 aa  56.6  0.0000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128758 
 
 
-
 
NC_008254  Meso_0885  XRE family plasmid maintenance system antidote protein  38.46 
 
 
102 aa  56.6  0.0000001  Chelativorans sp. BNC1  Bacteria  normal  0.673579  n/a   
 
 
-
 
NC_008463  PA14_61840  putative virulence-associated protein  44 
 
 
101 aa  56.6  0.0000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000756673  hitchhiker  0.00808433 
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  46.48 
 
 
167 aa  56.2  0.0000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3935  XRE family plasmid maintenance system antidote protein  37.5 
 
 
123 aa  55.5  0.0000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.155055 
 
 
-
 
NC_009943  Dole_2564  XRE family plasmid maintenance system antidote protein  34.44 
 
 
116 aa  55.8  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.63579  n/a   
 
 
-
 
NC_010681  Bphyt_3070  XRE family plasmid maintenance system antidote protein  42.17 
 
 
151 aa  55.5  0.0000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.314371  normal 
 
 
-
 
NC_008789  Hhal_1672  XRE family plasmid maintenance system antidote protein  41.1 
 
 
108 aa  54.7  0.0000004  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1543  XRE family plasmid maintenance system antidote protein  40 
 
 
118 aa  55.1  0.0000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.167279 
 
 
-
 
NC_011757  Mchl_1125  XRE family plasmid maintenance system antidote protein  41.67 
 
 
119 aa  54.3  0.0000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.19415 
 
 
-
 
NC_007951  Bxe_A0921  hypothetical protein  40.96 
 
 
151 aa  54.7  0.0000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008738  Maqu_4180  XRE family plasmid maintenance system antidote protein  40 
 
 
132 aa  54.7  0.0000005  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_4756  XRE family plasmid maintenance system antidote protein  37.08 
 
 
100 aa  54.3  0.0000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4087  XRE family plasmid maintenance system antidote protein  41.67 
 
 
99 aa  53.9  0.0000007  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1377  XRE family plasmid maintenance system antidote protein  33.7 
 
 
99 aa  53.5  0.0000009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_4027  XRE family plasmid maintenance system antidote protein  34.48 
 
 
101 aa  53.5  0.0000009  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3068  plasmid maintenance system antidote protein  39.73 
 
 
95 aa  53.1  0.000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.959159  n/a   
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  38.82 
 
 
99 aa  53.1  0.000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_011769  DvMF_1669  XRE family plasmid maintenance system antidote protein  40 
 
 
101 aa  53.5  0.000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009511  Swit_2184  XRE family plasmid maintenance system antidote protein  41.1 
 
 
102 aa  53.1  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  hitchhiker  0.00000446782 
 
 
-
 
NC_009511  Swit_2425  XRE family plasmid maintenance system antidote protein  41.43 
 
 
99 aa  53.5  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  0.674074  normal  0.184436 
 
 
-
 
NC_006369  lpl1093  hypothetical protein  34.78 
 
 
107 aa  52.4  0.000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  42.31 
 
 
99 aa  52.8  0.000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5479  XRE family plasmid maintenance system antidote protein  42.86 
 
 
99 aa  52.4  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0608  XRE family plasmid maintenance system antidote protein  32.94 
 
 
98 aa  52  0.000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2693  plasmid maintenance system antidote protein, XRE family  36.56 
 
 
92 aa  52  0.000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2829  XRE family plasmid maintenance system antidote protein  35.44 
 
 
110 aa  52  0.000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0896969  normal 
 
 
-
 
NC_007964  Nham_0579  XRE family plasmid maintenance system antidote protein  34.12 
 
 
101 aa  51.2  0.000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0418  addiction module antidote protein, HigA family  32.93 
 
 
131 aa  51.6  0.000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  34.41 
 
 
99 aa  51.6  0.000004  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
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