Gene Noc_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0571 
Symbol 
ID3706783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp617365 
End bp617688 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content57% 
IMG OID637737080 
ProductXRE family transcriptional regulator 
Protein accessionYP_342621 
Protein GI77164096 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATGC ACAATCCCCC TCATCCCGGC GAAGTTCTGA AGAGCTTGTG TTTGGAACCG 
CTGGGATTGA GTGTTACAGA GGCAGCGGAA GCACTTGGAG TCAGTCGCAA GACGCTTTCC
AGTATTCTAA ACGGGCGAGC CGGCATCAGC CCGGAGATGG CCATTCGCCT GTCCATGGCG
TTTGGTACGT CCGCAGAGAG CTGGCTGAAT CAGCAGTCGA TGTTTGATCT TTGGCAAGCC
GAGCGACGCG GGCCAAAGCC GCGTGTCAGG CGATTCAAGC CTACTCATCG CGAGCCCAAC
AATGGGTTGG AGCCGACACA CTGA
 
Protein sequence
MRMHNPPHPG EVLKSLCLEP LGLSVTEAAE ALGVSRKTLS SILNGRAGIS PEMAIRLSMA 
FGTSAESWLN QQSMFDLWQA ERRGPKPRVR RFKPTHREPN NGLEPTH