202 homologs were found in PanDaTox collection
for query gene Noc_0571 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_0571  XRE family transcriptional regulator  100 
 
 
107 aa  219  9e-57  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  65.56 
 
 
94 aa  127  4.0000000000000003e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  61.54 
 
 
96 aa  124  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  62.65 
 
 
98 aa  110  5e-24  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  65.85 
 
 
95 aa  109  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_007604  Synpcc7942_2319  XRE family plasmid maintenance system antidote protein  82.76 
 
 
72 aa  102  2e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  54.95 
 
 
94 aa  98.6  2e-20  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  53.85 
 
 
95 aa  99  2e-20  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  54.17 
 
 
100 aa  98.6  3e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_3101  XRE family plasmid maintenance system antidote protein  54.17 
 
 
100 aa  98.6  3e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.768418 
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  54.17 
 
 
100 aa  98.6  3e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3858  XRE family plasmid maintenance system antidote protein  54.26 
 
 
105 aa  98.2  3e-20  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  47.42 
 
 
108 aa  97.8  4e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  56.52 
 
 
91 aa  97.4  5e-20  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  50.54 
 
 
108 aa  97.1  8e-20  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6433  XRE family plasmid maintenance system antidote protein  53.12 
 
 
100 aa  96.3  1e-19  Burkholderia sp. 383  Bacteria  normal  normal  0.294261 
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  47.17 
 
 
105 aa  96.7  1e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_007963  Csal_1677  XRE family plasmid maintenance system antidote protein  54.44 
 
 
93 aa  96.3  1e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  58.43 
 
 
93 aa  96.3  1e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  56.52 
 
 
91 aa  95.9  2e-19  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  49.46 
 
 
96 aa  95.9  2e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  56.52 
 
 
91 aa  95.9  2e-19  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  56.52 
 
 
91 aa  94.4  5e-19  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  53.75 
 
 
96 aa  94  7e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  52.5 
 
 
95 aa  93.6  8e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_012560  Avin_42030  antitoxin protein  52.17 
 
 
95 aa  93.6  8e-19  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2779  plasmid maintenance system antidote protein  47 
 
 
110 aa  93.2  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.48213  n/a   
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  45.65 
 
 
107 aa  92.4  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  42.11 
 
 
103 aa  92.4  2e-18  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_010322  PputGB1_3643  XRE family plasmid maintenance system antidote protein  49.46 
 
 
95 aa  91.3  4e-18  Pseudomonas putida GB-1  Bacteria  normal  0.0160538  normal 
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  53.95 
 
 
104 aa  90.9  6e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  51.76 
 
 
101 aa  89.4  1e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1963  XRE family plasmid maintenance system antidote protein  44.09 
 
 
99 aa  89.7  1e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0393563 
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  51.28 
 
 
100 aa  89.4  2e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  53.75 
 
 
109 aa  89  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  47.56 
 
 
97 aa  87.4  6e-17  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1105  plasmid maintenance system antidote protein, XRE family  53.57 
 
 
90 aa  87  8e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0903859  normal 
 
 
-
 
NC_010511  M446_5444  XRE family plasmid maintenance system antidote protein  43.88 
 
 
109 aa  85.9  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.401369  normal  0.26731 
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  49.43 
 
 
97 aa  85.1  3e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  45.45 
 
 
99 aa  84  6e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  47.13 
 
 
96 aa  83.6  7e-16  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  44.9 
 
 
109 aa  83.2  0.000000000000001  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  39.08 
 
 
101 aa  81.6  0.000000000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  50.65 
 
 
104 aa  80.9  0.000000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0415  putative plasmid maintenance system antidote protein VapI  61.9 
 
 
78 aa  80.5  0.000000000000007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  47.5 
 
 
99 aa  79.7  0.00000000000001  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  50 
 
 
98 aa  79  0.00000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  48.68 
 
 
102 aa  78.6  0.00000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  48.68 
 
 
98 aa  77.4  0.00000000000006  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2425  plasmid maintenance system antidote protein, XRE family  43.53 
 
 
99 aa  75.1  0.0000000000003  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  48.72 
 
 
107 aa  74.7  0.0000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_009800  EcHS_A2644  putative addiction module  41.57 
 
 
1365 aa  74.3  0.0000000000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  45.74 
 
 
167 aa  73.9  0.0000000000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  42.11 
 
 
131 aa  73.6  0.0000000000009  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_009801  EcE24377A_0522  addiction module antidote protein  42.11 
 
 
131 aa  73.6  0.0000000000009  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0418  addiction module antidote protein, HigA family  42.11 
 
 
131 aa  73.6  0.0000000000009  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  42.11 
 
 
113 aa  73.2  0.000000000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
NC_011353  ECH74115_0576  addiction module antidote protein, HigA family  42.11 
 
 
131 aa  73.2  0.000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3133  XRE family plasmid maintenance system antidote protein  42.11 
 
 
131 aa  73.2  0.000000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.0484556  unclonable  0.0000000122724 
 
 
-
 
NC_012892  B21_00439  hypothetical protein  42.11 
 
 
113 aa  73.2  0.000000000001  Escherichia coli BL21  Bacteria  normal  0.540311  n/a   
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  47.44 
 
 
105 aa  72.8  0.000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_009800  EcHS_A0560  addiction module antidote protein  42.11 
 
 
131 aa  73.2  0.000000000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  47.44 
 
 
105 aa  72.8  0.000000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01435  predicted DNA-binding transcriptional regulator  39.13 
 
 
120 aa  72.4  0.000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  0.723657  n/a   
 
 
-
 
CP001637  EcDH1_2170  plasmid maintenance system antidote protein, XRE family  39.13 
 
 
94 aa  72.4  0.000000000002  Escherichia coli DH1  Bacteria  normal  0.266724  n/a   
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  43.84 
 
 
102 aa  72  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_012892  B21_01447  hypothetical protein  39.13 
 
 
120 aa  72.4  0.000000000002  Escherichia coli BL21  Bacteria  normal  0.753022  n/a   
 
 
-
 
NC_010658  SbBS512_E1740  addiction module antidote protein, HigA family  39.13 
 
 
94 aa  72.4  0.000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  0.368154  n/a   
 
 
-
 
NC_012917  PC1_3183  XRE family plasmid maintenance system antidote protein  42.11 
 
 
113 aa  72  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.171228  n/a   
 
 
-
 
NC_009801  EcE24377A_1659  addiction module antidote protein  39.13 
 
 
94 aa  72.4  0.000000000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2180  XRE family plasmid maintenance system antidote protein  39.13 
 
 
94 aa  72.4  0.000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.999071  normal 
 
 
-
 
NC_010498  EcSMS35_1697  addiction module antidote protein  39.13 
 
 
94 aa  72.4  0.000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.920473  normal 
 
 
-
 
NC_009800  EcHS_A1562  addiction module antidote protein  39.13 
 
 
94 aa  72.4  0.000000000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  44.87 
 
 
99 aa  71.6  0.000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  44.87 
 
 
99 aa  72  0.000000000003  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  47.37 
 
 
99 aa  69.7  0.00000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2031  XRE family plasmid maintenance system antidote protein  38.27 
 
 
106 aa  70.1  0.00000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.65469  n/a   
 
 
-
 
NC_011353  ECH74115_2089  addiction module antidote protein, HigA family  38.04 
 
 
94 aa  70.1  0.00000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0947  XRE family plasmid maintenance system antidote protein  38.2 
 
 
106 aa  68.9  0.00000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2425  XRE family plasmid maintenance system antidote protein  45.21 
 
 
99 aa  69.3  0.00000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.674074  normal  0.184436 
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  48.68 
 
 
99 aa  68.2  0.00000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_007925  RPC_1256  XRE family plasmid maintenance system antidote protein  42.5 
 
 
103 aa  67.8  0.00000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0149882 
 
 
-
 
NC_011004  Rpal_2524  XRE family plasmid maintenance system antidote protein  41.56 
 
 
103 aa  67.8  0.00000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0379048  n/a   
 
 
-
 
NC_007951  Bxe_A0921  hypothetical protein  46.58 
 
 
151 aa  67.4  0.00000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0768  XRE family plasmid maintenance system antidote protein  42.11 
 
 
100 aa  67.4  0.00000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2896  XRE family plasmid maintenance system antidote protein  44.3 
 
 
95 aa  67  0.00000000008  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.543418 
 
 
-
 
NC_010681  Bphyt_3070  XRE family plasmid maintenance system antidote protein  47.14 
 
 
151 aa  67  0.00000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.314371  normal 
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  42.86 
 
 
99 aa  66.2  0.0000000001  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
NC_010513  Xfasm12_0403  XRE family plasmid maintenance system antidote protein  42.86 
 
 
99 aa  66.2  0.0000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4745  XRE family plasmid maintenance system antidote protein  41.56 
 
 
104 aa  66.6  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.693896  normal 
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  43.06 
 
 
104 aa  66.6  0.0000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_008789  Hhal_1672  XRE family plasmid maintenance system antidote protein  44.16 
 
 
108 aa  66.2  0.0000000001  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0929  putative antidote protein  43.59 
 
 
105 aa  66.2  0.0000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2184  XRE family plasmid maintenance system antidote protein  42.47 
 
 
102 aa  66.6  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  hitchhiker  0.00000446782 
 
 
-
 
NC_009675  Anae109_1543  XRE family plasmid maintenance system antidote protein  39.53 
 
 
118 aa  66.6  0.0000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.167279 
 
 
-
 
NC_013441  Gbro_2894  addiction module antidote protein, HigA family  41.56 
 
 
119 aa  65.9  0.0000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.285023  n/a   
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  42.86 
 
 
101 aa  65.5  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1669  XRE family plasmid maintenance system antidote protein  42.67 
 
 
101 aa  65.1  0.0000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3187  XRE family plasmid maintenance system antidote protein  47.3 
 
 
94 aa  64.7  0.0000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0487579  normal 
 
 
-
 
NC_010002  Daci_1211  XRE family plasmid maintenance system antidote protein  40 
 
 
103 aa  64.7  0.0000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>