Gene RPC_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3187 
Symbol 
ID3972198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp3528117 
End bp3528401 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content69% 
IMG OID637926297 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_533048 
Protein GI90424678 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0487579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGC TGCGAACCCA TCCCGGCGAA GTGTTGCGCG AGGAATATCT GGTGCCGCTT 
GGCCTGTCGG CGCGGGCCTT GGCGAAGGCG CTGGATGTTC CGGCCAACCG GGTGAGCGAG
ATCGTGCGCG GCACCCGCGA CGTCAGCGCC GACACCGCCA TCCGGCTCGG CCGCTATTTC
GGCACCGACC CGCGGTTCTG GCTGAACCTG CAGGCCGCCC ATGATCTGTC GAAGGCGGAG
CTGGCCCACA ACTACAAGGC CATTCTGCCG CGCCCGGCGG CCTGA
 
Protein sequence
MPRLRTHPGE VLREEYLVPL GLSARALAKA LDVPANRVSE IVRGTRDVSA DTAIRLGRYF 
GTDPRFWLNL QAAHDLSKAE LAHNYKAILP RPAA