191 homologs were found in PanDaTox collection
for query gene Dole_2889 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  100 
 
 
104 aa  209  7.999999999999999e-54  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  59.38 
 
 
109 aa  119  9.999999999999999e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  53.68 
 
 
100 aa  117  4.9999999999999996e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  51.69 
 
 
104 aa  100  7e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  47.73 
 
 
102 aa  99.4  2e-20  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_012917  PC1_3183  XRE family plasmid maintenance system antidote protein  45.98 
 
 
113 aa  92  2e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.171228  n/a   
 
 
-
 
NC_007484  Noc_0571  XRE family transcriptional regulator  53.95 
 
 
107 aa  90.9  6e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  47.25 
 
 
95 aa  89.7  1e-17  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  44.58 
 
 
99 aa  89  2e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  50 
 
 
94 aa  89  2e-17  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  46.43 
 
 
113 aa  88.2  3e-17  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  46.43 
 
 
131 aa  88.6  3e-17  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_011353  ECH74115_0576  addiction module antidote protein, HigA family  46.43 
 
 
131 aa  88.6  3e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00439  hypothetical protein  46.43 
 
 
113 aa  88.2  3e-17  Escherichia coli BL21  Bacteria  normal  0.540311  n/a   
 
 
-
 
NC_009801  EcE24377A_0522  addiction module antidote protein  46.43 
 
 
131 aa  88.6  3e-17  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0418  addiction module antidote protein, HigA family  46.43 
 
 
131 aa  88.6  3e-17  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3133  XRE family plasmid maintenance system antidote protein  46.43 
 
 
131 aa  88.6  3e-17  Escherichia coli ATCC 8739  Bacteria  normal  0.0484556  unclonable  0.0000000122724 
 
 
-
 
NC_009800  EcHS_A0560  addiction module antidote protein  46.43 
 
 
131 aa  88.6  3e-17  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  44.74 
 
 
103 aa  87  7e-17  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_009671  Oant_4678  XRE family plasmid maintenance system antidote protein  52.78 
 
 
98 aa  85.5  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.171358  n/a   
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  52.27 
 
 
96 aa  85.1  3e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  48.78 
 
 
99 aa  85.1  3e-16  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_007964  Nham_2852  XRE family plasmid maintenance system antidote protein  39.78 
 
 
100 aa  84.3  5e-16  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  47.62 
 
 
98 aa  84  6e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1543  XRE family plasmid maintenance system antidote protein  48.15 
 
 
118 aa  84  6e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.167279 
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  47.56 
 
 
99 aa  83.6  9e-16  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  46.67 
 
 
95 aa  82.8  0.000000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_007963  Csal_1677  XRE family plasmid maintenance system antidote protein  48.05 
 
 
93 aa  82  0.000000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  43.37 
 
 
105 aa  81.6  0.000000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  43.37 
 
 
105 aa  81.6  0.000000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  49.35 
 
 
101 aa  81.3  0.000000000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  42.31 
 
 
108 aa  81.3  0.000000000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  46.75 
 
 
97 aa  80.9  0.000000000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3616  XRE family plasmid maintenance system antidote protein  41.94 
 
 
100 aa  80.9  0.000000000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.322775  n/a   
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  46.67 
 
 
105 aa  80.9  0.000000000000006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  51.85 
 
 
109 aa  80.5  0.000000000000007  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  40.74 
 
 
107 aa  80.5  0.000000000000007  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_010322  PputGB1_3643  XRE family plasmid maintenance system antidote protein  45.45 
 
 
95 aa  79.7  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  0.0160538  normal 
 
 
-
 
NC_011666  Msil_2106  XRE family plasmid maintenance system antidote protein  46.74 
 
 
93 aa  79.3  0.00000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1105  XRE family plasmid maintenance system antidote protein  40 
 
 
105 aa  79.7  0.00000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.912318  n/a   
 
 
-
 
NC_007484  Noc_2763  virulence-associated protein, putative  46.75 
 
 
100 aa  79  0.00000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  39.53 
 
 
96 aa  79  0.00000000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  45.57 
 
 
104 aa  79  0.00000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_007643  Rru_A2019  plasmid maintenance system antidote protein  47.37 
 
 
99 aa  78.6  0.00000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  43.59 
 
 
96 aa  78.6  0.00000000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  49.43 
 
 
91 aa  77.8  0.00000000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  49.43 
 
 
91 aa  77.8  0.00000000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  46.25 
 
 
94 aa  77.4  0.00000000000005  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  41.67 
 
 
101 aa  77.8  0.00000000000005  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  49.43 
 
 
91 aa  77.4  0.00000000000006  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0902  hypothetical protein  45.45 
 
 
199 aa  77.4  0.00000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2786  XRE family plasmid maintenance system antidote protein  47.22 
 
 
106 aa  77  0.00000000000007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  unclonable  0.000000094081  n/a   
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  44.32 
 
 
93 aa  77  0.00000000000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2927  XRE family plasmid maintenance system antidote protein  41.33 
 
 
97 aa  76.3  0.0000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.225345  normal 
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  44.74 
 
 
95 aa  76.6  0.0000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  47.22 
 
 
101 aa  76.3  0.0000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  41.25 
 
 
98 aa  76.6  0.0000000000001  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  42.42 
 
 
96 aa  76.6  0.0000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  48.05 
 
 
99 aa  75.5  0.0000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  46.25 
 
 
91 aa  75.5  0.0000000000002  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_008254  Meso_0885  XRE family plasmid maintenance system antidote protein  41.25 
 
 
102 aa  75.9  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  0.673579  n/a   
 
 
-
 
NC_009621  Smed_5479  XRE family plasmid maintenance system antidote protein  47.14 
 
 
99 aa  75.5  0.0000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  44.16 
 
 
98 aa  75.9  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  42.35 
 
 
99 aa  75.1  0.0000000000003  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_010002  Daci_1211  XRE family plasmid maintenance system antidote protein  42.39 
 
 
103 aa  75.5  0.0000000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0929  putative antidote protein  36.46 
 
 
105 aa  75.1  0.0000000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1216  XRE family plasmid maintenance system antidote protein  43.21 
 
 
101 aa  74.7  0.0000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3001  XRE family plasmid maintenance system antidote protein  44.44 
 
 
100 aa  73.6  0.0000000000008  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.770477 
 
 
-
 
NC_009720  Xaut_0276  XRE family plasmid maintenance system antidote protein  35.29 
 
 
102 aa  73.6  0.0000000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.545625  normal  0.0676813 
 
 
-
 
NC_009720  Xaut_2649  XRE family plasmid maintenance system antidote protein  35.29 
 
 
102 aa  73.6  0.0000000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.634453  normal 
 
 
-
 
NC_013530  Xcel_0947  XRE family plasmid maintenance system antidote protein  42.47 
 
 
106 aa  73.2  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_42030  antitoxin protein  41.56 
 
 
95 aa  73.2  0.000000000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4087  XRE family plasmid maintenance system antidote protein  46.34 
 
 
99 aa  73.2  0.000000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1963  XRE family plasmid maintenance system antidote protein  34.12 
 
 
99 aa  73.2  0.000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0393563 
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  45.21 
 
 
102 aa  72.4  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_010814  Glov_0608  XRE family plasmid maintenance system antidote protein  39.53 
 
 
98 aa  72.4  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3187  XRE family plasmid maintenance system antidote protein  40.91 
 
 
94 aa  72.8  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0487579  normal 
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  36.36 
 
 
108 aa  72  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  39.53 
 
 
99 aa  72.4  0.000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_009485  BBta_0431  hypothetical protein  35.71 
 
 
108 aa  72.8  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.202991  normal 
 
 
-
 
NC_011769  DvMF_1669  XRE family plasmid maintenance system antidote protein  40.45 
 
 
101 aa  72  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_1256  XRE family plasmid maintenance system antidote protein  37.23 
 
 
103 aa  71.6  0.000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0149882 
 
 
-
 
NC_010511  M446_5444  XRE family plasmid maintenance system antidote protein  40.79 
 
 
109 aa  71.2  0.000000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.401369  normal  0.26731 
 
 
-
 
NC_007643  Rru_A1065  plasmid maintenance system antidote protein  36.73 
 
 
101 aa  71.2  0.000000000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0834  XRE family plasmid maintenance system antidote protein  37.11 
 
 
102 aa  71.2  0.000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.625913  normal 
 
 
-
 
NC_007925  RPC_4745  XRE family plasmid maintenance system antidote protein  35.56 
 
 
104 aa  71.2  0.000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.693896  normal 
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  36.36 
 
 
107 aa  70.9  0.000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0634  XRE family plasmid maintenance system antidote protein  34.48 
 
 
102 aa  70.9  0.000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.757193  n/a   
 
 
-
 
NC_011060  Ppha_2031  XRE family plasmid maintenance system antidote protein  37.97 
 
 
106 aa  70.9  0.000000000006  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.65469  n/a   
 
 
-
 
NC_013174  Jden_0768  XRE family plasmid maintenance system antidote protein  36.59 
 
 
100 aa  70.9  0.000000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3858  XRE family plasmid maintenance system antidote protein  41.86 
 
 
105 aa  70.5  0.000000000008  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1754  virulence-associated protein, putative  45.83 
 
 
104 aa  70.1  0.000000000009  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0614542  n/a   
 
 
-
 
NC_007404  Tbd_0672  plasmid maintenance system antidote protein  43.84 
 
 
171 aa  70.1  0.00000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.15068  normal  0.669698 
 
 
-
 
NC_010508  Bcenmc03_3101  XRE family plasmid maintenance system antidote protein  43.02 
 
 
100 aa  70.1  0.00000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.768418 
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  43.02 
 
 
100 aa  70.1  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  35.16 
 
 
97 aa  69.7  0.00000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1125  XRE family plasmid maintenance system antidote protein  37.76 
 
 
119 aa  69.7  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.19415 
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  43.02 
 
 
100 aa  70.1  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5378  addiction module antidote protein  40.79 
 
 
101 aa  69.3  0.00000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.369538  n/a   
 
 
-
 
NC_007604  Synpcc7942_2319  XRE family plasmid maintenance system antidote protein  46.27 
 
 
72 aa  68.9  0.00000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
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