201 homologs were found in PanDaTox collection
for query gene Dfer_2505 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  100 
 
 
103 aa  213  8e-55  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  66.67 
 
 
101 aa  142  2e-33  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  46.51 
 
 
108 aa  94  7e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  47.06 
 
 
109 aa  93.2  1e-18  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  44.05 
 
 
104 aa  93.2  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0571  XRE family transcriptional regulator  42.11 
 
 
107 aa  92.4  2e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  43.9 
 
 
102 aa  90.5  7e-18  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_007964  Nham_2852  XRE family plasmid maintenance system antidote protein  42.53 
 
 
100 aa  90.1  1e-17  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  44.74 
 
 
104 aa  87  7e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_007517  Gmet_3001  XRE family plasmid maintenance system antidote protein  45.57 
 
 
100 aa  86.3  1e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.770477 
 
 
-
 
NC_010513  Xfasm12_0403  XRE family plasmid maintenance system antidote protein  41.18 
 
 
99 aa  85.5  2e-16  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  42.5 
 
 
99 aa  85.5  2e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  41.18 
 
 
99 aa  85.5  2e-16  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
NC_008254  Meso_0885  XRE family plasmid maintenance system antidote protein  40.96 
 
 
102 aa  84.3  5e-16  Chelativorans sp. BNC1  Bacteria  normal  0.673579  n/a   
 
 
-
 
NC_011004  Rpal_3616  XRE family plasmid maintenance system antidote protein  38.1 
 
 
100 aa  83.2  0.000000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.322775  n/a   
 
 
-
 
NC_009483  Gura_1216  XRE family plasmid maintenance system antidote protein  40.23 
 
 
101 aa  83.2  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1211  XRE family plasmid maintenance system antidote protein  41.11 
 
 
103 aa  82  0.000000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  46.25 
 
 
100 aa  82  0.000000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_009485  BBta_0902  hypothetical protein  34.09 
 
 
199 aa  82.4  0.000000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009671  Oant_4678  XRE family plasmid maintenance system antidote protein  41.33 
 
 
98 aa  82  0.000000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.171358  n/a   
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  46.99 
 
 
109 aa  82  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  41.77 
 
 
104 aa  81.6  0.000000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  41.03 
 
 
95 aa  81.6  0.000000000000003  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  37.65 
 
 
99 aa  81.3  0.000000000000005  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  38.1 
 
 
107 aa  80.9  0.000000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  39.39 
 
 
102 aa  79.7  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  36.9 
 
 
99 aa  80.1  0.00000000000001  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  38.55 
 
 
99 aa  79.3  0.00000000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  42.5 
 
 
95 aa  79  0.00000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_007514  Cag_1487  XRE family plasmid maintenance system antidote protein  44.57 
 
 
103 aa  78.2  0.00000000000003  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000000000645872  n/a   
 
 
-
 
NC_007925  RPC_4745  XRE family plasmid maintenance system antidote protein  40.48 
 
 
104 aa  78.6  0.00000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.693896  normal 
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  39.47 
 
 
99 aa  77.8  0.00000000000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  46.43 
 
 
91 aa  77.4  0.00000000000005  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_1125  XRE family plasmid maintenance system antidote protein  45.83 
 
 
119 aa  77.8  0.00000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.19415 
 
 
-
 
NC_011004  Rpal_2524  XRE family plasmid maintenance system antidote protein  38.1 
 
 
103 aa  77.8  0.00000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0379048  n/a   
 
 
-
 
NC_008463  PA14_61840  putative virulence-associated protein  39.02 
 
 
101 aa  77.4  0.00000000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000756673  hitchhiker  0.00808433 
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  43.75 
 
 
96 aa  77.4  0.00000000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  35.71 
 
 
98 aa  77.4  0.00000000000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  41.94 
 
 
91 aa  77  0.00000000000007  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  37.97 
 
 
101 aa  77  0.00000000000007  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  43.01 
 
 
91 aa  77  0.00000000000007  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  41.94 
 
 
91 aa  77  0.00000000000007  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  41.86 
 
 
98 aa  77  0.00000000000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3225  XRE family plasmid maintenance system antidote protein  43.21 
 
 
106 aa  77  0.00000000000008  Caulobacter sp. K31  Bacteria  normal  normal  0.114466 
 
 
-
 
NC_009656  PSPA7_5378  addiction module antidote protein  39.02 
 
 
101 aa  77  0.00000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.369538  n/a   
 
 
-
 
NC_010725  Mpop_2927  XRE family plasmid maintenance system antidote protein  35.79 
 
 
97 aa  76.3  0.0000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.225345  normal 
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  41.56 
 
 
93 aa  76.6  0.0000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0608  XRE family plasmid maintenance system antidote protein  39.02 
 
 
98 aa  75.9  0.0000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2779  plasmid maintenance system antidote protein  36.46 
 
 
110 aa  75.9  0.0000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.48213  n/a   
 
 
-
 
NC_008255  CHU_0642  hypothetical protein  43.42 
 
 
96 aa  75.9  0.0000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.000000446232  normal  0.460246 
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  40.24 
 
 
98 aa  75.5  0.0000000000002  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0947  XRE family plasmid maintenance system antidote protein  43.24 
 
 
106 aa  75.9  0.0000000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  41.03 
 
 
94 aa  75.9  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  42.86 
 
 
94 aa  75.1  0.0000000000003  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_008576  Mmc1_2896  XRE family plasmid maintenance system antidote protein  42.86 
 
 
95 aa  75.1  0.0000000000003  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.543418 
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  41.11 
 
 
167 aa  75.1  0.0000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0768  XRE family plasmid maintenance system antidote protein  42.11 
 
 
100 aa  74.3  0.0000000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3424  XRE family plasmid maintenance system antidote protein  38.55 
 
 
98 aa  73.9  0.0000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  36.78 
 
 
107 aa  73.9  0.0000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  37.97 
 
 
105 aa  73.9  0.0000000000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  37.97 
 
 
105 aa  73.9  0.0000000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_010725  Mpop_3935  XRE family plasmid maintenance system antidote protein  42.25 
 
 
123 aa  73.2  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  normal  0.155055 
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  36.25 
 
 
95 aa  73.2  0.000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_007484  Noc_2763  virulence-associated protein, putative  37.35 
 
 
100 aa  72.8  0.000000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_4027  XRE family plasmid maintenance system antidote protein  41.46 
 
 
101 aa  73.2  0.000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0672  plasmid maintenance system antidote protein  33.65 
 
 
171 aa  72.8  0.000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.15068  normal  0.669698 
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  40.26 
 
 
101 aa  72  0.000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4148  XRE family plasmid maintenance system antidote protein  37.5 
 
 
101 aa  72  0.000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.287171  normal 
 
 
-
 
NC_011666  Msil_2106  XRE family plasmid maintenance system antidote protein  39.74 
 
 
93 aa  72.4  0.000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_1377  XRE family plasmid maintenance system antidote protein  40.54 
 
 
99 aa  72.4  0.000000000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  34.78 
 
 
108 aa  72.4  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4828  XRE family plasmid maintenance system antidote protein  37.5 
 
 
101 aa  72  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  34.52 
 
 
96 aa  72.4  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  34.07 
 
 
96 aa  72  0.000000000003  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  36.71 
 
 
105 aa  71.6  0.000000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_011769  DvMF_1669  XRE family plasmid maintenance system antidote protein  42.86 
 
 
101 aa  72  0.000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007643  Rru_A3068  plasmid maintenance system antidote protein  39.19 
 
 
95 aa  71.2  0.000000000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.959159  n/a   
 
 
-
 
NC_011901  Tgr7_1105  XRE family plasmid maintenance system antidote protein  34.15 
 
 
105 aa  71.6  0.000000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.912318  n/a   
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  39.24 
 
 
131 aa  71.2  0.000000000005  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  42.5 
 
 
99 aa  70.9  0.000000000005  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1669  addiction module antidote protein  40.48 
 
 
101 aa  71.2  0.000000000005  Coxiella burnetii RSA 331  Bacteria  normal  0.179147  n/a   
 
 
-
 
NC_011060  Ppha_2031  XRE family plasmid maintenance system antidote protein  34.57 
 
 
106 aa  70.9  0.000000000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.65469  n/a   
 
 
-
 
NC_007925  RPC_3187  XRE family plasmid maintenance system antidote protein  40.54 
 
 
94 aa  71.2  0.000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0487579  normal 
 
 
-
 
NC_009727  CBUD_0533  virulence-associated protein I  40.48 
 
 
103 aa  71.2  0.000000000005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.888429  n/a   
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  39.24 
 
 
113 aa  70.9  0.000000000006  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
NC_010468  EcolC_3133  XRE family plasmid maintenance system antidote protein  39.24 
 
 
131 aa  70.9  0.000000000006  Escherichia coli ATCC 8739  Bacteria  normal  0.0484556  unclonable  0.0000000122724 
 
 
-
 
NC_011353  ECH74115_0576  addiction module antidote protein, HigA family  39.24 
 
 
131 aa  70.9  0.000000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_00439  hypothetical protein  39.24 
 
 
113 aa  70.9  0.000000000006  Escherichia coli BL21  Bacteria  normal  0.540311  n/a   
 
 
-
 
NC_009800  EcHS_A0560  addiction module antidote protein  39.24 
 
 
131 aa  70.9  0.000000000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  43.42 
 
 
97 aa  70.5  0.000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  34.48 
 
 
96 aa  70.5  0.000000000008  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3183  XRE family plasmid maintenance system antidote protein  35.29 
 
 
113 aa  70.5  0.000000000008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.171228  n/a   
 
 
-
 
NC_007643  Rru_A1065  plasmid maintenance system antidote protein  39.56 
 
 
101 aa  70.1  0.000000000009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6433  XRE family plasmid maintenance system antidote protein  37.23 
 
 
100 aa  70.1  0.00000000001  Burkholderia sp. 383  Bacteria  normal  normal  0.294261 
 
 
-
 
NC_007643  Rru_A2019  plasmid maintenance system antidote protein  34.94 
 
 
99 aa  70.1  0.00000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3236  XRE family plasmid maintenance system antidote protein  35.37 
 
 
94 aa  69.7  0.00000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.390775  normal 
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  36.47 
 
 
100 aa  69.3  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  36.47 
 
 
100 aa  69.3  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1543  XRE family plasmid maintenance system antidote protein  35.8 
 
 
118 aa  69.7  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.167279 
 
 
-
 
NC_010717  PXO_03903  addiction module antidote protein, HigA family  37.04 
 
 
96 aa  68.9  0.00000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.433469  n/a   
 
 
-
 
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