Gene Pput_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4192 
Symbol 
ID5193141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4692922 
End bp4693221 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content61% 
IMG OID640588669 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001269500 
Protein GI148549398 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.322269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA ACGGTATGCG TCCAATCCAT CCGGGTGAAA TCCTGCGGGA GGACTTCCAA 
AAGGAAATGG GCTTCAGCGC CGCGGCTCTG GCCAGGGCGT TGGGTGTAGC AACGCCAACC
GTCAACAACA TCCTGCGCGA ACGGGGCGGT GTTTCCGCCG ACATGGCACT GCGTCTGTCC
ATCTGCCTGG ACACCACCCC TGAGTTCTGG CTCAACCTGC AGACGGCCTT CGATCTGCGC
ACAGCCGAAC AGCAACACGG CGATGAGATC ATCGGGTCGG TCCAGCGCCT GGTCGCTTGA
 
Protein sequence
MLKNGMRPIH PGEILREDFQ KEMGFSAAAL ARALGVATPT VNNILRERGG VSADMALRLS 
ICLDTTPEFW LNLQTAFDLR TAEQQHGDEI IGSVQRLVA