Gene Dfer_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4500 
Symbol 
ID8228103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5431970 
End bp5432269 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content48% 
IMG OID644932346 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_003088866 
Protein GI255038245 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.550402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCG AAATGAAGCC GGTACACCCC GGCGCGGTAT TGCGAGAGGA TATTCTGAAG 
GAAATGAAAA TTTCGGTGAC GCGTGCTGCA AAAGAATTGA GTGTAAGCCG CAAGCAGTTG
TCGGAGGTGG TGAATGAAAC CGCTGCTATT TCGGCTGAAA TGGCTGTCAG ATTGGAAAGC
GGGTTCGGCG TTAGTGCGGA ATTTTGGCTA GATATGGAGA AGAAGTATGA TATCTGGCGA
ATTAAAAGCA GCGGCCGCGT TCAGAATGTG CATCGTATTA CGGCAGGTCC TATTATTTAA
 
Protein sequence
MESEMKPVHP GAVLREDILK EMKISVTRAA KELSVSRKQL SEVVNETAAI SAEMAVRLES 
GFGVSAEFWL DMEKKYDIWR IKSSGRVQNV HRITAGPII