Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3616 |
Symbol | |
ID | 6411292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3872903 |
End bp | 3873205 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642713496 |
Product | XRE family plasmid maintenance system antidote protein |
Protein accession | YP_001992591 |
Protein GI | 192291986 |
COG category | [R] General function prediction only |
COG ID | [COG3093] Plasmid maintenance system antidote protein |
TIGRFAM ID | [TIGR02607] addiction module antidote protein, HigA family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.322775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGA AACTCCCCCC TGTTCATCCC GGCGAAATTC TCCGCGAAGA GTTTCTGCTG CCGATGAACC TGTCGCCCTA CGCCGTCGCC GCAGCCTGCG GCGTACCGCG CACGCGCATC GAACGGCTGG CACGGCAGGA AACCCCAGTA ACGGCGGACA CCGCGCTGCG GCTGGCGAGA TATTTCGGCA CGACGCCGAA TTTCTGGATG AACATGCAGG CGCAGTACGA TCTGGAGGTC GCGGAAGACA ACAGCGCCGA CGAACTCAGG CGGATCAAGC CCATCAAGTC GAAAGCGGCT TAA
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Protein sequence | MTKKLPPVHP GEILREEFLL PMNLSPYAVA AACGVPRTRI ERLARQETPV TADTALRLAR YFGTTPNFWM NMQAQYDLEV AEDNSADELR RIKPIKSKAA
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