Gene Rpal_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3616 
Symbol 
ID6411292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3872903 
End bp3873205 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content61% 
IMG OID642713496 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001992591 
Protein GI192291986 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.322775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGA AACTCCCCCC TGTTCATCCC GGCGAAATTC TCCGCGAAGA GTTTCTGCTG 
CCGATGAACC TGTCGCCCTA CGCCGTCGCC GCAGCCTGCG GCGTACCGCG CACGCGCATC
GAACGGCTGG CACGGCAGGA AACCCCAGTA ACGGCGGACA CCGCGCTGCG GCTGGCGAGA
TATTTCGGCA CGACGCCGAA TTTCTGGATG AACATGCAGG CGCAGTACGA TCTGGAGGTC
GCGGAAGACA ACAGCGCCGA CGAACTCAGG CGGATCAAGC CCATCAAGTC GAAAGCGGCT
TAA
 
Protein sequence
MTKKLPPVHP GEILREEFLL PMNLSPYAVA AACGVPRTRI ERLARQETPV TADTALRLAR 
YFGTTPNFWM NMQAQYDLEV AEDNSADELR RIKPIKSKAA