160 homologs were found in PanDaTox collection
for query gene Rru_A2779 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2779  plasmid maintenance system antidote protein  100 
 
 
110 aa  224  4e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.48213  n/a   
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  87.88 
 
 
108 aa  176  7e-44  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1963  XRE family plasmid maintenance system antidote protein  76.04 
 
 
99 aa  156  1e-37  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0393563 
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  79.79 
 
 
107 aa  150  5e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5444  XRE family plasmid maintenance system antidote protein  56.82 
 
 
109 aa  101  3e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.401369  normal  0.26731 
 
 
-
 
NC_007484  Noc_0571  XRE family transcriptional regulator  47 
 
 
107 aa  93.2  1e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2425  plasmid maintenance system antidote protein, XRE family  53.66 
 
 
99 aa  90.9  6e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  45.74 
 
 
98 aa  89.7  1e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2425  XRE family plasmid maintenance system antidote protein  50 
 
 
99 aa  86.3  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  0.674074  normal  0.184436 
 
 
-
 
NC_011662  Tmz1t_3858  XRE family plasmid maintenance system antidote protein  52.38 
 
 
105 aa  84.7  4e-16  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1105  plasmid maintenance system antidote protein, XRE family  51.19 
 
 
90 aa  82.4  0.000000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0903859  normal 
 
 
-
 
NC_010508  Bcenmc03_3101  XRE family plasmid maintenance system antidote protein  48.84 
 
 
100 aa  80.9  0.000000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.768418 
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  48.84 
 
 
100 aa  80.5  0.000000000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  48.84 
 
 
100 aa  80.5  0.000000000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6433  XRE family plasmid maintenance system antidote protein  47.67 
 
 
100 aa  79.3  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.294261 
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  40.43 
 
 
109 aa  77.8  0.00000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  46.34 
 
 
95 aa  78.2  0.00000000000004  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  45.98 
 
 
96 aa  77.8  0.00000000000005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  48.78 
 
 
93 aa  76.6  0.0000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  41.38 
 
 
94 aa  76.6  0.0000000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  46.84 
 
 
101 aa  75.9  0.0000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  36.46 
 
 
103 aa  75.9  0.0000000000002  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  39.74 
 
 
100 aa  75.5  0.0000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_009800  EcHS_A2644  putative addiction module  41.25 
 
 
1365 aa  73.9  0.0000000000008  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  42.86 
 
 
99 aa  73.2  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_010322  PputGB1_3643  XRE family plasmid maintenance system antidote protein  43.01 
 
 
95 aa  73.6  0.000000000001  Pseudomonas putida GB-1  Bacteria  normal  0.0160538  normal 
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  40 
 
 
96 aa  72.4  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0415  putative plasmid maintenance system antidote protein VapI  47.3 
 
 
78 aa  71.2  0.000000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  39.33 
 
 
96 aa  70.9  0.000000000006  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  40.66 
 
 
95 aa  70.5  0.000000000007  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  39.02 
 
 
96 aa  69.3  0.00000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  35.87 
 
 
97 aa  68.9  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  40.24 
 
 
105 aa  68.9  0.00000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  40 
 
 
107 aa  68.6  0.00000000003  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  41.67 
 
 
98 aa  68.6  0.00000000003  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  33.77 
 
 
104 aa  68.2  0.00000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_009999  Sbal195_4593  XRE family plasmid maintenance system antidote protein  45.88 
 
 
1370 aa  68.2  0.00000000004  Shewanella baltica OS195  Bacteria  normal  0.387666  normal  0.556972 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  38.55 
 
 
104 aa  67.8  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  40.74 
 
 
105 aa  67.4  0.00000000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  40.74 
 
 
105 aa  67.4  0.00000000006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  36.25 
 
 
95 aa  66.6  0.0000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_007963  Csal_1677  XRE family plasmid maintenance system antidote protein  39.51 
 
 
93 aa  66.6  0.0000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  36.36 
 
 
99 aa  65.5  0.0000000002  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  41.03 
 
 
98 aa  65.5  0.0000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_007925  RPC_4745  XRE family plasmid maintenance system antidote protein  33.66 
 
 
104 aa  65.1  0.0000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.693896  normal 
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  45.78 
 
 
91 aa  65.1  0.0000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  45.78 
 
 
91 aa  65.1  0.0000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  43.9 
 
 
91 aa  64.7  0.0000000004  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2319  XRE family plasmid maintenance system antidote protein  46.77 
 
 
72 aa  64.3  0.0000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008738  Maqu_4180  XRE family plasmid maintenance system antidote protein  34.69 
 
 
132 aa  64.7  0.0000000005  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_2524  XRE family plasmid maintenance system antidote protein  30.69 
 
 
103 aa  63.9  0.0000000007  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0379048  n/a   
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  33.72 
 
 
102 aa  63.5  0.0000000008  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  32.47 
 
 
101 aa  63.2  0.000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  39.08 
 
 
109 aa  62.4  0.000000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_012560  Avin_42030  antitoxin protein  38.75 
 
 
95 aa  62  0.000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  41.98 
 
 
94 aa  61.6  0.000000004  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  36.9 
 
 
97 aa  60.8  0.000000006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  28.71 
 
 
108 aa  59.7  0.00000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_012917  PC1_3183  XRE family plasmid maintenance system antidote protein  34.21 
 
 
113 aa  57.8  0.00000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.171228  n/a   
 
 
-
 
NC_007964  Nham_2852  XRE family plasmid maintenance system antidote protein  32.1 
 
 
100 aa  57  0.00000008  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2184  XRE family plasmid maintenance system antidote protein  34.57 
 
 
102 aa  57  0.00000009  Sphingomonas wittichii RW1  Bacteria  normal  hitchhiker  0.00000446782 
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  31.07 
 
 
113 aa  56.6  0.0000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  31.07 
 
 
131 aa  56.6  0.0000001  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_012892  B21_00439  hypothetical protein  31.07 
 
 
113 aa  56.6  0.0000001  Escherichia coli BL21  Bacteria  normal  0.540311  n/a   
 
 
-
 
NC_009800  EcHS_A0560  addiction module antidote protein  31.07 
 
 
131 aa  56.6  0.0000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0576  addiction module antidote protein, HigA family  31.07 
 
 
131 aa  56.6  0.0000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3133  XRE family plasmid maintenance system antidote protein  31.07 
 
 
131 aa  56.6  0.0000001  Escherichia coli ATCC 8739  Bacteria  normal  0.0484556  unclonable  0.0000000122724 
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  33.71 
 
 
99 aa  55.8  0.0000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  39.02 
 
 
91 aa  55.5  0.0000003  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_010658  SbBS512_E0418  addiction module antidote protein, HigA family  30.1 
 
 
131 aa  55.1  0.0000003  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0522  addiction module antidote protein  30.1 
 
 
131 aa  55.1  0.0000003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2554  XRE family plasmid maintenance system antidote protein  29.76 
 
 
96 aa  55.1  0.0000003  Cyanothece sp. PCC 8802  Bacteria  normal  0.276945  normal  0.432751 
 
 
-
 
NC_010513  Xfasm12_0403  XRE family plasmid maintenance system antidote protein  30.86 
 
 
99 aa  54.7  0.0000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  30.86 
 
 
99 aa  54.7  0.0000004  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
NC_009636  Smed_2319  XRE family plasmid maintenance system antidote protein  35.63 
 
 
127 aa  54.3  0.0000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.622069 
 
 
-
 
NC_011060  Ppha_2031  XRE family plasmid maintenance system antidote protein  29.67 
 
 
106 aa  54.3  0.0000005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.65469  n/a   
 
 
-
 
NC_007951  Bxe_A0921  hypothetical protein  36.71 
 
 
151 aa  53.5  0.0000009  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  27.27 
 
 
99 aa  53.5  0.000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_011726  PCC8801_3561  XRE family plasmid maintenance system antidote protein  29.76 
 
 
96 aa  53.1  0.000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_3070  XRE family plasmid maintenance system antidote protein  35.44 
 
 
151 aa  52.8  0.000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.314371  normal 
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  26.14 
 
 
99 aa  52.4  0.000002  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  31.25 
 
 
101 aa  52  0.000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1105  XRE family plasmid maintenance system antidote protein  28.4 
 
 
105 aa  52  0.000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.912318  n/a   
 
 
-
 
NC_007643  Rru_A3068  plasmid maintenance system antidote protein  31.25 
 
 
95 aa  51.2  0.000004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.959159  n/a   
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  33.33 
 
 
99 aa  51.2  0.000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  31.51 
 
 
167 aa  51.6  0.000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  27.5 
 
 
102 aa  51.2  0.000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  28.57 
 
 
104 aa  50.8  0.000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_008576  Mmc1_2896  XRE family plasmid maintenance system antidote protein  32.56 
 
 
95 aa  50.4  0.000008  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.543418 
 
 
-
 
NC_007404  Tbd_0672  plasmid maintenance system antidote protein  32.5 
 
 
171 aa  50.4  0.000009  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.15068  normal  0.669698 
 
 
-
 
NC_009671  Oant_4678  XRE family plasmid maintenance system antidote protein  31.94 
 
 
98 aa  50.4  0.000009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.171358  n/a   
 
 
-
 
NC_012560  Avin_27690  plasmid maintenance system antidote protein  30.77 
 
 
99 aa  49.7  0.00001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0412  XRE family plasmid maintenance system antidote protein  34.94 
 
 
100 aa  49.7  0.00001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5378  addiction module antidote protein  29.63 
 
 
101 aa  48.9  0.00002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.369538  n/a   
 
 
-
 
NC_010725  Mpop_2927  XRE family plasmid maintenance system antidote protein  28.71 
 
 
97 aa  48.5  0.00003  Methylobacterium populi BJ001  Bacteria  normal  0.225345  normal 
 
 
-
 
NC_008009  Acid345_3424  XRE family plasmid maintenance system antidote protein  30.95 
 
 
98 aa  48.5  0.00003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1125  XRE family plasmid maintenance system antidote protein  31.08 
 
 
119 aa  48.5  0.00003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.19415 
 
 
-
 
NC_008463  PA14_61840  putative virulence-associated protein  29.63 
 
 
101 aa  48.5  0.00003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000756673  hitchhiker  0.00808433 
 
 
-
 
NC_009727  CBUD_0533  virulence-associated protein I  29.67 
 
 
103 aa  48.5  0.00003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.888429  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1669  addiction module antidote protein  29.67 
 
 
101 aa  48.5  0.00003  Coxiella burnetii RSA 331  Bacteria  normal  0.179147  n/a   
 
 
-
 
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