198 homologs were found in PanDaTox collection
for query gene Noc_1291 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_1291  XRE family transcriptional regulator  100 
 
 
98 aa  203  5e-52  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0415  putative plasmid maintenance system antidote protein VapI  97.44 
 
 
78 aa  160  4.0000000000000004e-39  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0571  XRE family transcriptional regulator  62.65 
 
 
107 aa  110  5e-24  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  53.41 
 
 
94 aa  96.3  1e-19  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_008608  Ppro_3836  XRE family plasmid maintenance system antidote protein  50.54 
 
 
96 aa  95.9  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009467  Acry_3241  XRE family plasmid maintenance system antidote protein  58.54 
 
 
95 aa  95.5  2e-19  Acidiphilium cryptum JF-5  Bacteria  normal  0.0714927  n/a   
 
 
-
 
NC_013733  Slin_6998  plasmid maintenance system antidote protein, XRE family  55.56 
 
 
95 aa  94.7  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  0.337811  normal  0.775047 
 
 
-
 
NC_011662  Tmz1t_3858  XRE family plasmid maintenance system antidote protein  56.32 
 
 
105 aa  94.4  5e-19  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  47.25 
 
 
96 aa  94  7e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_007964  Nham_0578  XRE family plasmid maintenance system antidote protein  46.81 
 
 
108 aa  92  2e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2469  XRE family plasmid maintenance system antidote protein  54.02 
 
 
100 aa  92.4  2e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_3083  XRE family plasmid maintenance system antidote protein  54.02 
 
 
100 aa  92.4  2e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_3101  XRE family plasmid maintenance system antidote protein  54.02 
 
 
100 aa  92.4  2e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.768418 
 
 
-
 
NC_010322  PputGB1_3643  XRE family plasmid maintenance system antidote protein  54.88 
 
 
95 aa  92  2e-18  Pseudomonas putida GB-1  Bacteria  normal  0.0160538  normal 
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  41.84 
 
 
97 aa  90.1  9e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2779  plasmid maintenance system antidote protein  45.74 
 
 
110 aa  89.7  1e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.48213  n/a   
 
 
-
 
NC_013422  Hneap_1633  plasmid maintenance system antidote protein, XRE family  45.83 
 
 
96 aa  89.4  1e-17  Halothiobacillus neapolitanus c2  Bacteria  normal  0.110422  n/a   
 
 
-
 
NC_007510  Bcep18194_A6433  XRE family plasmid maintenance system antidote protein  51.81 
 
 
100 aa  89  2e-17  Burkholderia sp. 383  Bacteria  normal  normal  0.294261 
 
 
-
 
NC_008686  Pden_1963  XRE family plasmid maintenance system antidote protein  43.62 
 
 
99 aa  88.6  2e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.0393563 
 
 
-
 
NC_013889  TK90_1105  plasmid maintenance system antidote protein, XRE family  52.94 
 
 
90 aa  88.6  3e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0903859  normal 
 
 
-
 
NC_007963  Csal_1677  XRE family plasmid maintenance system antidote protein  55.7 
 
 
93 aa  88.6  3e-17  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  48.19 
 
 
105 aa  87.8  5e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_007484  Noc_0697  XRE family transcriptional regulator  56.63 
 
 
101 aa  87.4  6e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  46.91 
 
 
95 aa  85.5  2e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_012560  Avin_42030  antitoxin protein  52.44 
 
 
95 aa  85.9  2e-16  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1484  XRE family plasmid maintenance system antidote protein  43.33 
 
 
107 aa  85.9  2e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2342  XRE family plasmid maintenance system antidote protein  49.45 
 
 
93 aa  85.5  2e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2319  XRE family plasmid maintenance system antidote protein  67.24 
 
 
72 aa  85.1  3e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  47.62 
 
 
104 aa  84  6e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_013422  Hneap_0372  XRE family plasmid maintenance system antidote protein  44.58 
 
 
96 aa  82  0.000000000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0422  virulence-associated protein, putative  50 
 
 
97 aa  81.3  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0361  XRE family plasmid maintenance system antidote protein  52.44 
 
 
91 aa  80.1  0.000000000000009  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1144  XRE family plasmid maintenance system antidote protein  51.22 
 
 
91 aa  79.7  0.00000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0405  XRE family plasmid maintenance system antidote protein  51.22 
 
 
91 aa  79.7  0.00000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  44.87 
 
 
99 aa  78.2  0.00000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_013037  Dfer_1123  XRE family plasmid maintenance system antidote protein  44.32 
 
 
109 aa  77.4  0.00000000000005  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.0000000000109926  normal  0.590059 
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  41.86 
 
 
103 aa  77  0.00000000000008  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_007950  Bpro_5380  XRE family plasmid maintenance system antidote protein  51.28 
 
 
94 aa  76.6  0.0000000000001  Polaromonas sp. JS666  Bacteria  normal  0.031339  hitchhiker  0.000847786 
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  48.05 
 
 
100 aa  75.9  0.0000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_010511  M446_5444  XRE family plasmid maintenance system antidote protein  45.98 
 
 
109 aa  75.5  0.0000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.401369  normal  0.26731 
 
 
-
 
NC_011004  Rpal_2524  XRE family plasmid maintenance system antidote protein  41.11 
 
 
103 aa  73.6  0.0000000000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0379048  n/a   
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  50 
 
 
167 aa  73.6  0.0000000000009  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  48.78 
 
 
105 aa  73.2  0.000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  48.78 
 
 
105 aa  73.2  0.000000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  42.86 
 
 
102 aa  73.2  0.000000000001  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_007901  Rfer_4449  XRE family plasmid maintenance system antidote protein  46.15 
 
 
91 aa  72.4  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_011365  Gdia_2425  plasmid maintenance system antidote protein, XRE family  42.17 
 
 
99 aa  72.4  0.000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  43.01 
 
 
104 aa  72.8  0.000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  38.95 
 
 
98 aa  72.8  0.000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_007643  Rru_A2430  plasmid maintenance system antidote protein  40.96 
 
 
108 aa  71.6  0.000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.216096  n/a   
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  46.67 
 
 
109 aa  70.9  0.000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2184  XRE family plasmid maintenance system antidote protein  43.18 
 
 
102 aa  70.9  0.000000000005  Sphingomonas wittichii RW1  Bacteria  normal  hitchhiker  0.00000446782 
 
 
-
 
NC_007925  RPC_4745  XRE family plasmid maintenance system antidote protein  40 
 
 
104 aa  69.7  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.693896  normal 
 
 
-
 
NC_009636  Smed_2319  XRE family plasmid maintenance system antidote protein  46.67 
 
 
127 aa  69.3  0.00000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.622069 
 
 
-
 
NC_013730  Slin_2499  XRE family plasmid maintenance system antidote protein  41.77 
 
 
101 aa  68.2  0.00000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.0881387  normal  0.214118 
 
 
-
 
NC_009800  EcHS_A2644  putative addiction module  50 
 
 
1365 aa  68.2  0.00000000003  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  38.14 
 
 
99 aa  66.6  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_004349  SO_A0023  plasmid maintenance system antidote protein HigA  34.07 
 
 
99 aa  66.6  0.0000000001  Shewanella oneidensis MR-1  Bacteria  normal  0.0227137  n/a   
 
 
-
 
NC_010338  Caul_3225  XRE family plasmid maintenance system antidote protein  43.9 
 
 
106 aa  66.2  0.0000000001  Caulobacter sp. K31  Bacteria  normal  normal  0.114466 
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  42.31 
 
 
107 aa  66.2  0.0000000001  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  38.14 
 
 
99 aa  66.6  0.0000000001  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  36.59 
 
 
102 aa  65.5  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_008320  Shewmr7_4040  XRE family plasmid maintenance system antidote protein  41.56 
 
 
98 aa  65.9  0.0000000002  Shewanella sp. MR-7  Bacteria  normal  n/a   
 
 
-
 
NC_008738  Maqu_4180  XRE family plasmid maintenance system antidote protein  38.89 
 
 
132 aa  64.7  0.0000000004  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_2881  XRE family plasmid maintenance system antidote protein  42.31 
 
 
96 aa  64.3  0.0000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.516447  n/a   
 
 
-
 
NC_012560  Avin_27690  plasmid maintenance system antidote protein  43.42 
 
 
99 aa  63.9  0.0000000006  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0921  hypothetical protein  47.89 
 
 
151 aa  63.5  0.0000000009  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2894  addiction module antidote protein, HigA family  34.83 
 
 
119 aa  63.5  0.0000000009  Gordonia bronchialis DSM 43247  Bacteria  normal  0.285023  n/a   
 
 
-
 
NC_010681  Bphyt_3070  XRE family plasmid maintenance system antidote protein  47.89 
 
 
151 aa  62.8  0.000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.314371  normal 
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  39.78 
 
 
99 aa  63.2  0.000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2564  XRE family plasmid maintenance system antidote protein  40.26 
 
 
116 aa  62.8  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.63579  n/a   
 
 
-
 
NC_010002  Daci_1211  XRE family plasmid maintenance system antidote protein  37.89 
 
 
103 aa  62.8  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  39.02 
 
 
104 aa  62  0.000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_013037  Dfer_4918  XRE family plasmid maintenance system antidote protein  34.74 
 
 
99 aa  61.2  0.000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128758 
 
 
-
 
NC_007514  Cag_1487  XRE family plasmid maintenance system antidote protein  37.5 
 
 
103 aa  61.2  0.000000005  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000000000645872  n/a   
 
 
-
 
NC_013161  Cyan8802_2554  XRE family plasmid maintenance system antidote protein  37.65 
 
 
96 aa  61.2  0.000000005  Cyanothece sp. PCC 8802  Bacteria  normal  0.276945  normal  0.432751 
 
 
-
 
NC_009511  Swit_2425  XRE family plasmid maintenance system antidote protein  36.36 
 
 
99 aa  60.8  0.000000007  Sphingomonas wittichii RW1  Bacteria  normal  0.674074  normal  0.184436 
 
 
-
 
NC_011726  PCC8801_3561  XRE family plasmid maintenance system antidote protein  37.65 
 
 
96 aa  60.5  0.000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009671  Oant_4678  XRE family plasmid maintenance system antidote protein  39.73 
 
 
98 aa  60.5  0.000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.171358  n/a   
 
 
-
 
NC_011353  ECH74115_2089  addiction module antidote protein, HigA family  41.03 
 
 
94 aa  60.1  0.000000009  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_01435  predicted DNA-binding transcriptional regulator  41.03 
 
 
120 aa  60.1  0.00000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.723657  n/a   
 
 
-
 
CP001637  EcDH1_2170  plasmid maintenance system antidote protein, XRE family  41.03 
 
 
94 aa  60.1  0.00000001  Escherichia coli DH1  Bacteria  normal  0.266724  n/a   
 
 
-
 
NC_010658  SbBS512_E1740  addiction module antidote protein, HigA family  41.03 
 
 
94 aa  60.1  0.00000001  Shigella boydii CDC 3083-94  Bacteria  normal  0.368154  n/a   
 
 
-
 
NC_007484  Noc_0417  XRE family transcriptional regulator  40.58 
 
 
104 aa  60.1  0.00000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1562  addiction module antidote protein  41.03 
 
 
94 aa  60.1  0.00000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0483  XRE family plasmid maintenance system antidote protein  42.65 
 
 
350 aa  59.7  0.00000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1697  addiction module antidote protein  41.03 
 
 
94 aa  60.1  0.00000001  Escherichia coli SMS-3-5  Bacteria  normal  0.920473  normal 
 
 
-
 
NC_010468  EcolC_2180  XRE family plasmid maintenance system antidote protein  41.03 
 
 
94 aa  60.1  0.00000001  Escherichia coli ATCC 8739  Bacteria  normal  0.999071  normal 
 
 
-
 
NC_012892  B21_01447  hypothetical protein  41.03 
 
 
120 aa  60.1  0.00000001  Escherichia coli BL21  Bacteria  normal  0.753022  n/a   
 
 
-
 
NC_009801  EcE24377A_1659  addiction module antidote protein  41.03 
 
 
94 aa  60.1  0.00000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1377  XRE family plasmid maintenance system antidote protein  35 
 
 
99 aa  59.7  0.00000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  41.33 
 
 
131 aa  58.9  0.00000002  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  40.26 
 
 
101 aa  59.3  0.00000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1256  XRE family plasmid maintenance system antidote protein  41.25 
 
 
103 aa  59.3  0.00000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0149882 
 
 
-
 
NC_011060  Ppha_1548  XRE family plasmid maintenance system antidote protein  38.37 
 
 
363 aa  58.9  0.00000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0522  addiction module antidote protein  41.33 
 
 
131 aa  58.9  0.00000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0418  addiction module antidote protein, HigA family  41.33 
 
 
131 aa  58.9  0.00000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1672  XRE family plasmid maintenance system antidote protein  41.89 
 
 
108 aa  58.9  0.00000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  39.24 
 
 
113 aa  58.5  0.00000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  39.02 
 
 
99 aa  58.2  0.00000003  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
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