Gene Dole_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2564 
Symbol 
ID5695415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3100242 
End bp3100592 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content53% 
IMG OID641265172 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001530444 
Protein GI158522574 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.63579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA AAGATTTCCT TGATCCCATT GTACCGGGTG AAATCCTGCG TGAAGACTTT 
ATGGAGCCGA TGCAGATCAG TATCAATCAG CTCTCCCGGG ACCTGGCCGT TCCTCCGAAC
AGAATCAGCG AGATTGTAAA CGGCAAAAGA AGCATCTCCG TCGACACGGC CCTTTGGCTG
GAGCGCTATT TCGGGGTGGA GGCCCAGTTC TGGCTGAACC TTCAGTCCGA GTATGACCTT
CGCGTAATGA AACGTAAAAT AGGGCCGGAT ATCAAGCAGC GCATTATTCC GGCCAAAAGG
CCCGCTACGA ATTCGACAGG CCGCAGCCCA AGTAGTCATC GCCCAGGATG A
 
Protein sequence
MSNKDFLDPI VPGEILREDF MEPMQISINQ LSRDLAVPPN RISEIVNGKR SISVDTALWL 
ERYFGVEAQF WLNLQSEYDL RVMKRKIGPD IKQRIIPAKR PATNSTGRSP SSHRPG