Gene Smed_5479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5479 
Symbol 
ID5319781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp448255 
End bp448554 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content55% 
IMG OID640777238 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001314170 
Protein GI150377575 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATA TCCTTCCCCA CGTCCATCCG GGCGAAATCC TCCGCGAGGA GTACCTACGT 
CCCCTTAACA TGAGCGCTGG CGCACTGGCG AAAAAGCTCA ATGTTCCTCG CACCCGCATC
GAACGTATAG CGGCGGAGCA AACACCGATC ACGACGGATA CCGCGTTGCG CCTCGCCAAA
TATCTCCGCA CAACGCCGGA GTTTTGGATG AACATGCAGA TCAGCTTCAA CCTCAAGACA
GAGGAAATAG CACTTCGTCG CGAACTGGAG TTGATCCCGG AAATCGATAG AGCGGCATAG
 
Protein sequence
MTHILPHVHP GEILREEYLR PLNMSAGALA KKLNVPRTRI ERIAAEQTPI TTDTALRLAK 
YLRTTPEFWM NMQISFNLKT EEIALRRELE LIPEIDRAA