29 homologs were found in PanDaTox collection
for query gene Swol_0422 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008346  Swol_0422  uroporphyrinogen decarboxylase (URO-D)  100 
 
 
293 aa  605  9.999999999999999e-173  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1823  uroporphyrinogen decarboxylase  39.65 
 
 
287 aa  261  6.999999999999999e-69  Methanococcus maripaludis C6  Archaea  normal  0.952283  n/a   
 
 
-
 
NC_009637  MmarC7_0079  uroporphyrinogen decarboxylase  40 
 
 
287 aa  261  8e-69  Methanococcus maripaludis C7  Archaea  normal  0.0659182  hitchhiker  0.00575431 
 
 
-
 
NC_009135  MmarC5_0836  uroporphyrinogen decarboxylase  39.3 
 
 
287 aa  260  2e-68  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013165  Shel_26160  hypothetical protein  30.88 
 
 
296 aa  145  6e-34  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0419  methylcobalamin:coenzyme M methyltransferase  32.38 
 
 
348 aa  139  4.999999999999999e-32  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.919138  n/a   
 
 
-
 
NC_009975  MmarC6_1825  methylcobalamin:coenzyme M methyltransferase  28.46 
 
 
342 aa  132  7.999999999999999e-30  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0077  methylcobalamin:coenzyme M methyltransferase  27.72 
 
 
342 aa  131  2.0000000000000002e-29  Methanococcus maripaludis C7  Archaea  normal  normal  0.268466 
 
 
-
 
NC_009135  MmarC5_0838  methylcobalamin:coenzyme M methyltransferase  26.95 
 
 
342 aa  130  3e-29  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013165  Shel_26140  methylcobalamin:coenzyme M methyltransferase  31.73 
 
 
341 aa  118  9.999999999999999e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2786  methylcobalamin:coenzyme M methyltransferase  27.93 
 
 
355 aa  100  3e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3639  methylcobalamin:coenzyme M methyltransferase  29.15 
 
 
339 aa  91.3  2e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.739876  normal 
 
 
-
 
NC_007955  Mbur_0808  methylcobalamin:coenzyme M methyltransferase  27.35 
 
 
338 aa  86.3  6e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1054  methylcobalamin:coenzyme M methyltransferase  26.58 
 
 
339 aa  73.9  0.000000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A0841  methylcobalamin:coenzyme M methyltransferase  26.36 
 
 
339 aa  72.8  0.000000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_0452  methylcobalamin:coenzyme M methyltransferase  25.23 
 
 
310 aa  66.6  0.0000000005  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007644  Moth_2346  methyltransferase MtaA/CmuA  28.44 
 
 
349 aa  64.3  0.000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.189161 
 
 
-
 
NC_011830  Dhaf_2069  methyltransferase MtaA/CmuA family  27.27 
 
 
348 aa  63.9  0.000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.096371  n/a   
 
 
-
 
NC_007644  Moth_2100  methyltransferase MtaA/CmuA  26.85 
 
 
350 aa  57.8  0.0000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A1688  methylcobalamin:coenzyme M methyltransferase  22.88 
 
 
341 aa  57.4  0.0000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.967324  normal  0.14364 
 
 
-
 
NC_007644  Moth_2102  methyltransferase MtaA/CmuA  27.11 
 
 
338 aa  55.8  0.0000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01860  uroporphyrinogen-III decarboxylase  23.22 
 
 
375 aa  55.8  0.0000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_2082  methylcobalamin:coenzyme M methyltransferase  22.63 
 
 
344 aa  55.5  0.000001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_1005  methylcobalamin:coenzyme M methyltransferase  22.07 
 
 
345 aa  55.1  0.000001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011661  Dtur_0731  Uroporphyrinogen decarboxylase (URO-D)  26.24 
 
 
319 aa  53.1  0.000006  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.20168  n/a   
 
 
-
 
NC_007355  Mbar_A3585  methylcobalamin:coenzyme M methyltransferase  23.61 
 
 
367 aa  51.2  0.00002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.936166  normal  0.073488 
 
 
-
 
NC_011830  Dhaf_0196  Uroporphyrinogen decarboxylase (URO-D)  30.99 
 
 
335 aa  49.7  0.00006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.343296  n/a   
 
 
-
 
NC_007955  Mbur_0957  uroporphyrinogen decarboxylase  24.45 
 
 
348 aa  43.9  0.004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007644  Moth_1447  cobalamin B12-binding  23.7 
 
 
556 aa  43.1  0.005  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.0642463 
 
 
-
 
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