Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0836 |
Symbol | |
ID | 4927977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 809548 |
End bp | 810411 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640166336 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001097360 |
Protein GI | 134045874 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CATTTTCATG CATCAGCGAC AATTTAGAAA ACATTCCAAA AGAATTAATT GCATCAAAAA ATTTAAAATT TCCAGATATA CATGAAAATC TTTCAGATAT GGTAGAATTT TCAAAAATAA TGAAAGAACA TAAAAAAGAC CTGTTCTGTA GAGTTCCATT CTGCATGACT GTTGAAGCAG AATCATTGGG TGCTAAAATT AACATGGGCG ATGAAAAATA TGGCCCAAGA GCTAAAGAAT ACGCTTTTAA AAATTTAGAT GAGTTAGAAA CCATAAAACC GATTGATCTA ACTTCTGGTC GAATCAGAAT GGTTCTTGAT GCTATTCAGG AGTTAAAAAA GTCAGGTGAA CTCCCAATTC TTACCGTTGA AGGGCCAATT ACAATAATTT CCTCATTAAT GGAGTCTAGA ATTTTTTATA AAGAGCTCAG AAAGAACCCC GAAAGAATGA ATACTTTCTT AAATTTTTTA GAAGATGAAA TTGTAAAATA TGTCCTCTCG GGAATTGAAA ATGGGGCTAA AATTATTTCT TTTGGAGATC CAGCAGGAAG TATTGATATT GTTGGTCCAA AAGTCTTTAG GGAATACAGC GGAAAGATTG CTAAAAACAT TATCGAAAAA GTCAAATCAA AAGAAAAAAA CTGTATTATT CACGTTTGTG GAAAAACGTC TGTTTCACTT GAAAATGAAG GAATGTACGA ATTTAACCCA ATAAACTGCA ATTCTGAAAC ATATGGAAAA GCAATTTATG AACTAATCCG TGAGAACACA AAGACAAAGA TTATTGGGCA CAACTGCATC AAAAAATCAA TTTATAAAAT TCCAAAAAAT ACAATTTGGG AAATAAAAGA ATAA
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Protein sequence | MKKTFSCISD NLENIPKELI ASKNLKFPDI HENLSDMVEF SKIMKEHKKD LFCRVPFCMT VEAESLGAKI NMGDEKYGPR AKEYAFKNLD ELETIKPIDL TSGRIRMVLD AIQELKKSGE LPILTVEGPI TIISSLMESR IFYKELRKNP ERMNTFLNFL EDEIVKYVLS GIENGAKIIS FGDPAGSIDI VGPKVFREYS GKIAKNIIEK VKSKEKNCII HVCGKTSVSL ENEGMYEFNP INCNSETYGK AIYELIRENT KTKIIGHNCI KKSIYKIPKN TIWEIKE
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