Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0422 |
Symbol | |
ID | 4281368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 500823 |
End bp | 501704 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638137310 |
Product | uroporphyrinogen decarboxylase (URO-D) |
Protein accession | YP_753131 |
Protein GI | 114565977 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCA GCGGTATTAA CTTTGTCTGC GCAGGCCGGG ATGAACTGGA AATACCCCGG GAGATTGTAG AGCAGGGAGG ATTTCATTTT CCTGATCTTC ATAGTGACAG TCAGGAAATG GCGCGGCTGG CTCTGGCTAT AAAGCATAAT AAGCAAAACA GCATCTGCAT GCTGCCGTTT TGCCTGACGG TGGAGGCCGA AGCGCTGGGT GCCCGGGTGA ATCTCGGCAA TGCAAGCTCA GGCCCCAGAA TCAGTTCATA TTCATATGAA AGCATTGAGC AGCTTAAAGA TCTGAGGATG GTGGATTTTA ATTCAGGCAG AATTAAATCA GTGCTTGATG CAGTAGAGAC GTTGACCCAA AGCGGGGAAG TGGTGGCTCT TAATGTGAGC GGACCCTTTA CTATCATAAC TTCTCTTTTC GATCCCATGG TCTTATATAA AGCGGTCAAA AAAAACCGGG AAGGGATAGA CGATGTACTA AGGATAATAG AGGGAATTAT ACTACGTTAT ATCCTTGAAG CGATTAAAAT GGGTGCAAGA ATTATATCCT ATGCCGATGC GGTCGGTACC GCTGACATGG TTGGGCCCAA GATATACAAA GATATAGCAG GTATTGCCAG CCTGAATTTG TTAAAGCGAC TTCAGACAAG TGATGAGCTG GATGGTTGTT TTGTCCATAT CTGCGGCAAA ACCTCGGTAT CTCTGGAAAA TCACGGCTTT GCAAGGTCGT ATCCGATTGA GGTGAGTTCT AACCAAACCT ATGGCCAGGC TATAACAGAA TTATTATACA AATCACAAGG CAGCAGATTC ATAGGACACA ATTGCATGAA GAGAACGGTT AATAAACTAA AGGATAACAC AGTTTGGAGG ATAGAGTTTT AG
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Protein sequence | MSVSGINFVC AGRDELEIPR EIVEQGGFHF PDLHSDSQEM ARLALAIKHN KQNSICMLPF CLTVEAEALG ARVNLGNASS GPRISSYSYE SIEQLKDLRM VDFNSGRIKS VLDAVETLTQ SGEVVALNVS GPFTIITSLF DPMVLYKAVK KNREGIDDVL RIIEGIILRY ILEAIKMGAR IISYADAVGT ADMVGPKIYK DIAGIASLNL LKRLQTSDEL DGCFVHICGK TSVSLENHGF ARSYPIEVSS NQTYGQAITE LLYKSQGSRF IGHNCMKRTV NKLKDNTVWR IEF
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