Gene Mbar_A3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3585 
Symbol 
ID3625809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4601232 
End bp4602335 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content49% 
IMG OID637702416 
Productmethylcobalamin:coenzyme M methyltransferase 
Protein accessionYP_307033 
Protein GI73671018 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01463] methyltransferase, MtaA/CmuA family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.936166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.073488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGTG AAATGACTCC AACCCGAAGA GTTATGGCAG CAGTGCTTGG AGGTAGGGTT 
GATTACGTAC CCCCAGCGAA TCCCCTCGCT CAGACTACAA CTGAACTGAT GCAGATATGC
AATGCTTCCT GGCCAAAAGC CCACTTTGAC AGCAAGATGA TGGCAGACCT TGCAGCCGCT
CCCTATGAAG TTTGTGGTAT AGAGGCTGCA CGTCCCCAGT TTGACATTTC TCTCGAAGCG
GAGGTTCTGG GGTGTAAACT TGACTGGGAC AAACCGGACA GACCTCCCGT AATAGGTCCT
GCTTATACCG ATCCCTCCAA TGTAACCTGG CCTGACAATC TGGAAGAAGC CGGAAGAATT
CCGGTAGTGC TCGGAGCGAT TGAGGAACTG AGGACGCGCT ATGACGGCAT GCTTCCTGTT
ATCCCACTAC TTACATCTCC TTTTACGATA GCAAGTCATA TAGCAGGCGT CGAAAACATG
GCAAAGTGGA CAAAGACCGC TCCAGAAAAA GCACATGCCT TCATTGAGGC AGCAACAGAT
TTCGTGATAG CTTACGGGAA GCTGCAGACT ATTTATGGAG CACACATCGT CTTCCTCGCC
GACCCTTCGG CTTCCGGGGA CCTGATTTCT GCGGAAACGT ACAGAGAATT CGTACTTCCT
GCCCACAAAA GAATAGCAAA GGAAATCAGC TGTCCCCAGA TCTTGCACAT CTGCGGAGAT
ACAAGTAAAC TTCTGCCCTA CATAAAACAG AGTGGAATTG ACTGCTTCTC CTTCGATGCC
GTTCCGGTCT CGTATTGCCG TCAGGTAGTG GGCAATGAAA TGTCCATCCT CGGAAGCCTG
GATGTTATAG ATCTTATGCC AAACGGCACC CCCGAACAGG TTTATAACAG AACAAGGGAA
TGCATCCTGC AGGGAGCTGA TATTGTTGGG ACTTCGTGTG GACTCTCATT TGGAACCTCC
CTCGAAAATC TCAGGGCATA TGTCAGGGCT TGTAAAGAGA CACAAATCCC GAAATGTGAT
GATGTGGAAG ACCTTATCAG GCAGATTGGA ATCGGTATTG GAAAGAATAT GAGAGAAAAC
GTGTTGGGTG GGATGAAGGA ATGA
 
Protein sequence
MVSEMTPTRR VMAAVLGGRV DYVPPANPLA QTTTELMQIC NASWPKAHFD SKMMADLAAA 
PYEVCGIEAA RPQFDISLEA EVLGCKLDWD KPDRPPVIGP AYTDPSNVTW PDNLEEAGRI
PVVLGAIEEL RTRYDGMLPV IPLLTSPFTI ASHIAGVENM AKWTKTAPEK AHAFIEAATD
FVIAYGKLQT IYGAHIVFLA DPSASGDLIS AETYREFVLP AHKRIAKEIS CPQILHICGD
TSKLLPYIKQ SGIDCFSFDA VPVSYCRQVV GNEMSILGSL DVIDLMPNGT PEQVYNRTRE
CILQGADIVG TSCGLSFGTS LENLRAYVRA CKETQIPKCD DVEDLIRQIG IGIGKNMREN
VLGGMKE