Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1823 |
Symbol | |
ID | 5737713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1711581 |
End bp | 1712444 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641284322 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001549865 |
Protein GI | 159906203 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.952283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA CATTTTCATG CATCAGCGAC AATTTAGAAA ATATTCCAAA AGAATTAATC GAATCAAAAA ATTTAAAATT TCCAAATATA CATGAAAATC TTATCGATAT GGTAAAATTT TCAAAAATAA TAAAAGAACA TAAAAAAGAC CTATTCTGTA GGGTCCCATT CTGCATGACT GTAGAAGCAG AGTCACTGGG TGCTAAAATT AATATGGGCG ATGAAAAATA TGGTCCAAGA GCTAAAGAAT ACGCTTTTAA AACATTAGAT GAATTAGAAA TCATAAAACC GATTGATTTA ACAAATGGCA GGATTAAAAT AGTTCTTGAT GCTATTCATG AGCTAAAAGA GTCTGGTGAA ATCCCAATTC TTGCAGTTGA AGGCCCGATT ACAATAATTT CCTCATTAAT GGAGTCTAGA ATTTTTTACA AAGAACTTAA GAAGAACCCT GAAAGAATGA ATACTTTCTT AAATTTTCTA GAAGATGAAA TTGTAAAATA TATCCTCTCG GGAATTGAAA ATGGGGCTAA AATTATTTCT TTTGGAGATC CAGCGGGAAG TATTGATATT GTTGGTCCAA AAGTCTTTAG AGAATATAGC GGAAAGATTG CTAAAAACAT TATTGAAAAA GTTAAATCAC AAGAAAAAAA CTGTATTATT CACGTTTGTG GAAAAACATC TGTTTCACTT GAAAATGAAG GAATGTATGA ATTTAACCCA ATAAATTGTA ATTCTGAAAC CTATGGAAAA GCACTTCATG AGATAATCCA TGAAAATACA AAAACAAAGA TTATCGGGCA TAACTGCATT AAAAAATCAA TTTATAAAAT TCCAAAAAAT ACAATCTGGG AAATAAAAGA ATAA
|
Protein sequence | MKKTFSCISD NLENIPKELI ESKNLKFPNI HENLIDMVKF SKIIKEHKKD LFCRVPFCMT VEAESLGAKI NMGDEKYGPR AKEYAFKTLD ELEIIKPIDL TNGRIKIVLD AIHELKESGE IPILAVEGPI TIISSLMESR IFYKELKKNP ERMNTFLNFL EDEIVKYILS GIENGAKIIS FGDPAGSIDI VGPKVFREYS GKIAKNIIEK VKSQEKNCII HVCGKTSVSL ENEGMYEFNP INCNSETYGK ALHEIIHENT KTKIIGHNCI KKSIYKIPKN TIWEIKE
|
| |