Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_26160 |
Symbol | |
ID | 8396504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2885798 |
End bp | 2886688 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987358 |
Product | hypothetical protein |
Protein accession | YP_003144968 |
Protein GI | 257065296 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGGTG CGAAGAAGAT CCGCGATTTC AGATGCACGT ACGCGAACTC GGTTGGTGTG AGCCCTGAGG TCACCCAGGG GCTTGACCTG GAGTTTCCCG ATGCCTACTG CCACCGCGAC ACGATGGCCA CGCTGTCTTT GGCCATTAAG GAACACGATG GGGCGAATTT CTGCCTGCTG CCCTTCTGCC GCACGGTGGA AGTTGAGGCC ATGGGCGGCA ACGTGAAGCT TGGCGATGCA AAATCGTGCC CCCGCGCGGC CGATCCCGTC TGCGAGTCTT ACGAGGACTT CATGGCGCTG CCTGACATCG ACTTCTCGCA GGGGCGCATC CGCGAGGTGC TGGAGGCGTG CCGCATCCTG AAGCAGCGCG GCGAAACCGT GTGTCTTGAA ATCGTGGGAC CTTGGACCAT GATGCAGTCG CTCATGGATG CGGCGAAGGT GTTCAAGATG TTCCGCAAAC AGCCTGATCA GGCGGTAGAG GTTATGTGGA AGCTCGCCGG ACAGCTTCTT CCCTATGTGG ATGAGGCGCG CGAGTGCGGA GTGGACGTCA TCACGCTGTC GGATTCCGCC GGCACGTTGA GCATCTTGGG CCCGCGCGTG ATGGAGAAGT CGATGCTCTT GTTCATGGCG GATTTCGTGC GCGCCTTAGA CGAGCGCATC GGCGGCAGCA TGGTGCTTCA GCTGTGCCCG AAGATCGCCT ACGCCCTTAT CGATACCGGA TGTGCCGAGG TGAAGATTCA CGATCTTGGC GAATCCGTCG ACTTCCTGGA AGCGCTGCTG CGCCTGCGTG GCGAGGCGCG CATTGTGGGC CAGACCTGCA TCAAGTACGT GGGCGTGAGG GTCCTTAACG GCAAGATTCG CGAACTTGTG ATGAAGGAAC CCCAGGCCTG A
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Protein sequence | MVGAKKIRDF RCTYANSVGV SPEVTQGLDL EFPDAYCHRD TMATLSLAIK EHDGANFCLL PFCRTVEVEA MGGNVKLGDA KSCPRAADPV CESYEDFMAL PDIDFSQGRI REVLEACRIL KQRGETVCLE IVGPWTMMQS LMDAAKVFKM FRKQPDQAVE VMWKLAGQLL PYVDEARECG VDVITLSDSA GTLSILGPRV MEKSMLLFMA DFVRALDERI GGSMVLQLCP KIAYALIDTG CAEVKIHDLG ESVDFLEALL RLRGEARIVG QTCIKYVGVR VLNGKIRELV MKEPQA
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