Gene Mbar_A1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1054 
Symbol 
ID3624516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1289988 
End bp1291007 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content48% 
IMG OID637699944 
Productmethylcobalamin:coenzyme M methyltransferase 
Protein accessionYP_304602 
Protein GI73668587 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01463] methyltransferase, MtaA/CmuA family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TTACACTTAA AACGAGACTC TTAGCTGCCC TTGAAGGCAA GCCCGTTGAC 
AAAGTACCTG TCTGCTCCGT AACCCAGACC GGGATTGTAG AACTTATGGA TAAAGTTGGA
GCTGCCTGGC CTGAAGCTCA CACCAATCCC GAACTTATGG CAAAACTGGC AATTGCTAAC
TATGAACTTA GTGGACTTGA AGCTGTAAGG CTTCCCTACT GTCTTACCGT TCTTGGTGAA
GCAATGGGCT GTGAAATCAA CATGGGTACC AAGAACAGGC AGCCGTCTGT CACCGCTAGC
CCCTACCCCA AAAACCTCGA TGGCGCAGTC GTCCCTGCAG ATCTCCTGCA GAGAAACAGA
ATTCCAGCCG TGCTCGAAGC CATTAAAATT GTCAGGGAAA AAGTAGGACC TGATGTACCA
ATTATCGGAG GTATGGAAGG CCCGGTTACA CTAGCTTCCG ACCTGATAAG TGTAAAATCC
TTCATGAAAT GGTCCATTAA AAAAACTGAC CTCTTCGAAC AGGCTCTTGA TATCTCCGCA
GAAGCTGCAA TCGCCTATGC AAACGCAATG GTCGAAGCTG GTGCAGATGT TATCGCTATT
GCAGACCCTG TCGCTTCTCC TGACCTCATG AGCCCGGAAA CATTTAAACA GTTCCTCCAG
TCAAGATTAC AGAAGTTTTC CGCTGGTGTT AACTCCGTGA CTGTACTCCA CATCTGTGGT
AAGGTTAACG CGATCCTCAG CGACATGGCA GACTGCGGTT TTGAAGGACT CAGCGTCGAA
GAAAAGATCG GTACCGCAGC GGAAGGAAAG AAAATCATTG GAGACAGAGC AAGATTAGTA
GGAAATATTT CCAGTCCTTT TACCCTGCTG CCTGGACCTA TTGATAAGAT AAAAGCTGAA
GCAAAAGTAG CTCTTGAAGG CGGCATAGAT GTGCTTGCAC CTGGCTGTGG GATTGCACCC
ATGACTCCTC TCGAAAATGT CAAAGCTTTG GTCGCAGCAA GAGACGAGTA CTACGCCTGA
 
Protein sequence
MSEFTLKTRL LAALEGKPVD KVPVCSVTQT GIVELMDKVG AAWPEAHTNP ELMAKLAIAN 
YELSGLEAVR LPYCLTVLGE AMGCEINMGT KNRQPSVTAS PYPKNLDGAV VPADLLQRNR
IPAVLEAIKI VREKVGPDVP IIGGMEGPVT LASDLISVKS FMKWSIKKTD LFEQALDISA
EAAIAYANAM VEAGADVIAI ADPVASPDLM SPETFKQFLQ SRLQKFSAGV NSVTVLHICG
KVNAILSDMA DCGFEGLSVE EKIGTAAEGK KIIGDRARLV GNISSPFTLL PGPIDKIKAE
AKVALEGGID VLAPGCGIAP MTPLENVKAL VAARDEYYA