Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0079 |
Symbol | |
ID | 5328171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 98890 |
End bp | 99753 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640792600 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001329300 |
Protein GI | 150402006 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0659182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00575431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA CATTTTCATG CATCAGCGAC AATTTAGAAA AGATTCCAAA AGAATTAACT GAATCAAACA ATTTAAAATT TCCAAATGTA CATGAAAATC TTTCAGATAT GGTGGAATTT TCAAAAATAA TGAAAGAACA CAAAAAAGAC CTCTTTTGTA GAGTTCCATT CTGCATGACT GTTGAAGCAG AATCATTTGG TGCAAAAATT AATATGGGCG ATGAAAAATA TGGCCCAAGA GCTAAAGAAT ATGCTTTTAA AAATTTAGAT GAGTTAGAAA CCATAAAACC GATTGATTTA ACTTCTGGCC GAATTAAAAT AGTTCTTGAT GCAGTCCATG CATTAAAAGA GTCGGGTGAA ATCCCAATTC TTGCAGTTGA AGGGCCAATT ACAATAATTT CCTCATTAAT GGAGTCTAGA ATTTTTTACA AAGAACTTAG GAAAAACCCC GAAAGAATGA ATAATTTCTT AAATTTTTTA GAAGATGAAA TTGTAAAATA TATCCTATCG GGAATTGAAA ATGGTGCTAA AATTATTTCT TTTGGAGATC CAGCAGGAAG CATTGATATA GTTGGTCCAA AAATCTTTAG GGAATACAGC GGAAAAATTG CTAAAAACAT TATCGAAAAA GTAAAATCCA ACGAAAAAAA CTGTATTATT CACGTTTGTG GAAAAACGTC TGTTTCACTC GAAAATGAAG GAATGTATGA ATTTAATCCA ATAAATTGCA ATTCTGAAAC ATATGGAAAA GCAATTTATG AAATAATCCG TGAAAACACA AAAACAAAGA TTATCGGGCA TAACTGCATC AAAAAATCAA TTTATAAAAT TCCAAAAAAT ACAATTTGGG AAATAAAAGA ATAA
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Protein sequence | MKKTFSCISD NLEKIPKELT ESNNLKFPNV HENLSDMVEF SKIMKEHKKD LFCRVPFCMT VEAESFGAKI NMGDEKYGPR AKEYAFKNLD ELETIKPIDL TSGRIKIVLD AVHALKESGE IPILAVEGPI TIISSLMESR IFYKELRKNP ERMNNFLNFL EDEIVKYILS GIENGAKIIS FGDPAGSIDI VGPKIFREYS GKIAKNIIEK VKSNEKNCII HVCGKTSVSL ENEGMYEFNP INCNSETYGK AIYEIIRENT KTKIIGHNCI KKSIYKIPKN TIWEIKE
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