Gene MmarC7_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0079 
Symbol 
ID5328171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp98890 
End bp99753 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content30% 
IMG OID640792600 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001329300 
Protein GI150402006 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0659182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00575431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAA CATTTTCATG CATCAGCGAC AATTTAGAAA AGATTCCAAA AGAATTAACT 
GAATCAAACA ATTTAAAATT TCCAAATGTA CATGAAAATC TTTCAGATAT GGTGGAATTT
TCAAAAATAA TGAAAGAACA CAAAAAAGAC CTCTTTTGTA GAGTTCCATT CTGCATGACT
GTTGAAGCAG AATCATTTGG TGCAAAAATT AATATGGGCG ATGAAAAATA TGGCCCAAGA
GCTAAAGAAT ATGCTTTTAA AAATTTAGAT GAGTTAGAAA CCATAAAACC GATTGATTTA
ACTTCTGGCC GAATTAAAAT AGTTCTTGAT GCAGTCCATG CATTAAAAGA GTCGGGTGAA
ATCCCAATTC TTGCAGTTGA AGGGCCAATT ACAATAATTT CCTCATTAAT GGAGTCTAGA
ATTTTTTACA AAGAACTTAG GAAAAACCCC GAAAGAATGA ATAATTTCTT AAATTTTTTA
GAAGATGAAA TTGTAAAATA TATCCTATCG GGAATTGAAA ATGGTGCTAA AATTATTTCT
TTTGGAGATC CAGCAGGAAG CATTGATATA GTTGGTCCAA AAATCTTTAG GGAATACAGC
GGAAAAATTG CTAAAAACAT TATCGAAAAA GTAAAATCCA ACGAAAAAAA CTGTATTATT
CACGTTTGTG GAAAAACGTC TGTTTCACTC GAAAATGAAG GAATGTATGA ATTTAATCCA
ATAAATTGCA ATTCTGAAAC ATATGGAAAA GCAATTTATG AAATAATCCG TGAAAACACA
AAAACAAAGA TTATCGGGCA TAACTGCATC AAAAAATCAA TTTATAAAAT TCCAAAAAAT
ACAATTTGGG AAATAAAAGA ATAA
 
Protein sequence
MKKTFSCISD NLEKIPKELT ESNNLKFPNV HENLSDMVEF SKIMKEHKKD LFCRVPFCMT 
VEAESFGAKI NMGDEKYGPR AKEYAFKNLD ELETIKPIDL TSGRIKIVLD AVHALKESGE
IPILAVEGPI TIISSLMESR IFYKELRKNP ERMNNFLNFL EDEIVKYILS GIENGAKIIS
FGDPAGSIDI VGPKIFREYS GKIAKNIIEK VKSNEKNCII HVCGKTSVSL ENEGMYEFNP
INCNSETYGK AIYEIIRENT KTKIIGHNCI KKSIYKIPKN TIWEIKE