Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0196 |
Symbol | |
ID | 7257157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 218984 |
End bp | 219991 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643560110 |
Product | Uroporphyrinogen decarboxylase (URO-D) |
Protein accession | YP_002456700 |
Protein GI | 219666265 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.343296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAGTT TACAAAGGCT AGAGGCTGCT CTGGCAGGCC ATGCTTTTGA TGAGGCACTT TGTATTCCGT TGGTATTTGG CGGGGCAGCT TTTTTAACGG ATGTAAAATT AAAAAGATAT CTGCAAAACG GAGAAATTTT GGCACAATGT CAATTAGATT CACAGCAGAA GTTCGACTAT GATGCGGTTT TTGTCTATGG CGATAATTGT ATTGAAGCAG AGGCTTTGGG ATCAAGAGTA TATTTTCCGG AAAATGCTTA TCCCTATATT GAAAAATATC GACTGGAGGA TCCCAGGCAA TTAAAAGACT TACCGGATTT CAACCCTTCG ACAGATGGCA GAATGCCGGA GTTGCTGAGG GCTGTCGCGC TTCTCAAGAC CGAACTGGGA GATAGCCTGC CTATTGCCGG GGTGGTCTTG GGACCGATGA GCATTGCCAG CCAGTTGATG GGACTGGAAA GACTTTTATA CCTCTTACTT GATTCGCCTT GTGAATTTGC AGACATAATA AGATTTGCTT CCGGAATCAC CTTAAAAGCC GGTTTGGCCC TCCTTGCTCA AGGCGCCCAT ATCTCGGCAG TAATCGATCC CAGCGCTTCC CAAAGCATTC TGCCCAGCGA GATGTTTGGC CGCTATTTAT TACCCACTAT CCGTGATATC TTCTCCCAAT TCAAAGGGGC GGGGGCGATG GCTTCCTGGT TGGTGATCAC GGGAAACAGC CAAGGGCTTT TGCCCTACTA TCGCCAATGC GGAGTGGATA TTGCGGGTAT AGATTATGAA GTGCCGTTGG CAGAAGCACT GAAGTGGGAA GGAGACTTTT TGATATCCGG AAATATTAAA CCATATCGCT TTGTCAATCA AACACCTCAG GAAATCATCC GTGAAGGCAA AGAGTTAATA AGTCTGGCAG CCGGCAGGAG GTTTATTTTA AGCTCAGGCT GTGAAGTGCC TTTAGATACC AAGCCGGAGA ATCTTGCTGC ATTGATTAAG GCGGTTAGGG ATGTGTGA
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Protein sequence | MNSLQRLEAA LAGHAFDEAL CIPLVFGGAA FLTDVKLKRY LQNGEILAQC QLDSQQKFDY DAVFVYGDNC IEAEALGSRV YFPENAYPYI EKYRLEDPRQ LKDLPDFNPS TDGRMPELLR AVALLKTELG DSLPIAGVVL GPMSIASQLM GLERLLYLLL DSPCEFADII RFASGITLKA GLALLAQGAH ISAVIDPSAS QSILPSEMFG RYLLPTIRDI FSQFKGAGAM ASWLVITGNS QGLLPYYRQC GVDIAGIDYE VPLAEALKWE GDFLISGNIK PYRFVNQTPQ EIIREGKELI SLAAGRRFIL SSGCEVPLDT KPENLAALIK AVRDV
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