Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01860 |
Symbol | |
ID | 8394078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 228277 |
End bp | 229404 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644984959 |
Product | uroporphyrinogen-III decarboxylase |
Protein accession | YP_003142606 |
Protein GI | 257062934 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTAGATA TAGAGAAATA CCTGCACGGG TTGGAGGTGA AACCCGACGA GCTGACGGCG CTGGAGCGCG ACCGCCTGTA CAGCCAGGGA AAACCGGTCG ACCGCATCCC CTGCGTGCTT GACACGGGCG AGACCATGGC GCCCCTCATG GGCATGTCCA TCGCAGATTA CTACCATTCC GCCGAAAAGA TGTGCGACCT GGAGGTGTAC CTGCAGGAGC ACTTCCATTC CGACGGCGCC GGGCTTTCCA CCACGCTGCG CGGCATGGCC GAAGCCATGG GTTCGGAAAT CGCCTACTTC GACAACAACG TGGCGCAGCT CAAGACGCCG GCCCTCAAGA GCCTCGACGA GGTGGGTAAG GCGAAGCTCG TCGACGTCGA CAAGGACGGA CGCCTTCCCA TCATCTTGAA GGCATTGGCC ATGGTGAAGG AAAAGCTGGG CGCCACGGTG CCCGTCGGCG GCACCGTGAC CGGGCCGTTC ACCATCGCGG CCATGGTCGT GGGCACGCAA ACTCTGCTCA AGGGCCTGCG CAAGCACCCA GACCAGGTAA AAGAGCTGAT GGAAGTCATC GTCGAGAACA ACAACCGCTA CATCGAGCGC CTGCTGGACA TCGGTGTGGG CATCGGGTTC GCCGACCCTG TCAGCTCGTC GTCCATCATT CGCGCCGAAC AGTACCGCGA ATTCTCGCTG CCCTACCTGA AGAAGAACGT CGACTTCATC AAGAGCCGTG GCGGCGGGTG CGGCCTGCAC ATCTGCGGCA AAAGCCGCGC GTTATGGGAC GACATCATAA CCAGCGGCAT CGGCACCTTC GGCCCCGACA ACGTGGAGGA CATGGCCGAA GCGAAGGAGG TCTTAGGGCC CCACATGTGC ATCCAGGGAA ACGTTCCTCC CGTGGAGGTC ATGCTTTACG GTACGCCGTA CGACGTGCTC AGGTCGGCGC GGGAATCCAT CCGCAAGGCC TACGACTCGC CCCGCGGCTT CGTGCTGACG TCCGGATGCC AGATGCCCGT GGGCACGCCC CGCGAGAACA TGACCGCGCT TATGGACGCC GCCCGGATCT TCGGCCGCTG GCCCGTGGAT CCGTCGCTGC TCGAAGGCGA CGAGGACGAG TCGTTGCCCG TGCAATAG
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Protein sequence | MVDIEKYLHG LEVKPDELTA LERDRLYSQG KPVDRIPCVL DTGETMAPLM GMSIADYYHS AEKMCDLEVY LQEHFHSDGA GLSTTLRGMA EAMGSEIAYF DNNVAQLKTP ALKSLDEVGK AKLVDVDKDG RLPIILKALA MVKEKLGATV PVGGTVTGPF TIAAMVVGTQ TLLKGLRKHP DQVKELMEVI VENNNRYIER LLDIGVGIGF ADPVSSSSII RAEQYREFSL PYLKKNVDFI KSRGGGCGLH ICGKSRALWD DIITSGIGTF GPDNVEDMAE AKEVLGPHMC IQGNVPPVEV MLYGTPYDVL RSARESIRKA YDSPRGFVLT SGCQMPVGTP RENMTALMDA ARIFGRWPVD PSLLEGDEDE SLPVQ
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